Sequence type analysis and recombinational tests (START)

The 32-bit Windows application START is implemented using Visual Basic and C++ and performs analyses to aid in the investigation of bacterial population structure using multilocus sequence data. These analyses include data summary, lineage assignment, and tests for recombination and selection. Avail...

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Bibliographic Details
Published in:Bioinformatics 2001-12, Vol.17 (12), p.1230-1231
Main Authors: Jolley, K. A., Feil, E. J., Chan, M.-S., Maiden, M. C. J.
Format: Article
Language:English
Subjects:
Biological and medical sciences
Databases, Nucleic Acid
Fundamental and applied biological sciences. Psychology
General aspects
Genes, Bacterial
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Recombination, Genetic
Sequence Analysis - methods
Software
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Description
Summary:The 32-bit Windows application START is implemented using Visual Basic and C++ and performs analyses to aid in the investigation of bacterial population structure using multilocus sequence data. These analyses include data summary, lineage assignment, and tests for recombination and selection. Availability: START is available at http://outbreak.ceid.ox.ac.uk/software.htm. Contact: keith.jolley@ceid.ox.ac.uk * To whom correspondence should be addressed.
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/17.12.1230