Comparative analysis on microbial community associated with different gastrointestinal regions of wild northern snakehead Channa argus Cantor, 1842

Microbial communities in different gastrointestinal regions (stomach, foregut, midgut, and hindgut) of the northern snakehead Channa argus (Cantor, 1842) were compared by polymerase chain reaction and partial 16S rDNA sequencing. A total of 194, 140, 212, and 122 OTUs were detected in the stomach, f...

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Bibliographic Details
Published in:Journal of oceanology and limnology 2018-03, Vol.36 (2), p.450-456
Main Authors: Miao, Shuyan, Zhao, Chenze, Zhu, Jinyu, Pan, Mingzhu
Format: Article
Language:English
Subjects:
Bacteria
Biology
Cetobacterium
Channa argus
Clostridium
Comparative analysis
Cyanobacteria
Earth and Environmental Science
Earth Sciences
Firmicutes
Foregut
Fusobacteria
Halomonas
Hindgut
Microbial activity
Microbiomes
Microorganisms
Midgut
Nucleotide sequence
Oceanography
Paracoccus
PCR
Plesiomonas
Polymerase chain reaction
Prevotella
Prevotella copri
Proteobacteria
rRNA 16S
Shewanella
Sphingomonas
Spirochetes
Stomach
Vibrio
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Summary:Microbial communities in different gastrointestinal regions (stomach, foregut, midgut, and hindgut) of the northern snakehead Channa argus (Cantor, 1842) were compared by polymerase chain reaction and partial 16S rDNA sequencing. A total of 194, 140, 212, and 122 OTUs were detected in the stomach, foregut, midgut, and hindgut, respectively. Significant differences were found in the Sobs, ACE, Shannon, and Simpson indices among samples ( P
ISSN:2096-5508
2523-3521
DOI:10.1007/s00343-018-6292-9