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Strict consistency between genetic and topographic landscapes of the brown tree frog (Buergeria robusta) in Taiwan
[Display omitted] ► 564 brown tree frogs from 31 drainages were sequenced for phylogeographic analysis. ► The eastern and western populations showed a prominent genetic divergence. ► Genetic landscape presented extremely high congruence to the topography of Taiwan. ► Post-glacial expansion was stron...
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| Published in: | Molecular phylogenetics and evolution 2012-01, Vol.62 (1), p.251-262 |
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| creator | Lin, Hung-Du Chen, Ying-Rong Lin, Si-Min |
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► 564 brown tree frogs from 31 drainages were sequenced for phylogeographic analysis. ► The eastern and western populations showed a prominent genetic divergence. ► Genetic landscape presented extremely high congruence to the topography of Taiwan. ► Post-glacial expansion was strongly and consistently supported by different analyses.
Taiwan presents an excellent opportunity to build a phylogeographic paradigm for fine-scaled differentiation occurring within short distances on an single island. Due to the limitation of habitat availability on the island, demographic histories of species in Taiwan were strongly influenced by glacial–interglacial cycles. Nevertheless, there are relatively few studies demonstrating such phylogeographic patterns for islands, especially in subtropical Asia. In this study, we aim to construct the genetic landscape of a philopatric stream frog Buergeria robusta by an intense and fine-scaled collection throughout the island. The deduced genetic landscape of B. robusta presented extremely high congruence with the actual topography of Taiwan. Two major lineages were found on the eastern and the western sides of Taiwan with a non-overlapping distribution, indicating the importance of the Central Mountain Range as the major biogeographic barrier. Both clades showed a strong and congruent tendency of demographic or distributional expansion in recent history based on different analyses. Population expansion of such a subtropical lowland species might be a result from a release of available habitat in post-glacial periods. |
| doi_str_mv | 10.1016/j.ympev.2011.09.022 |
| format | article |
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► 564 brown tree frogs from 31 drainages were sequenced for phylogeographic analysis. ► The eastern and western populations showed a prominent genetic divergence. ► Genetic landscape presented extremely high congruence to the topography of Taiwan. ► Post-glacial expansion was strongly and consistently supported by different analyses.
Taiwan presents an excellent opportunity to build a phylogeographic paradigm for fine-scaled differentiation occurring within short distances on an single island. Due to the limitation of habitat availability on the island, demographic histories of species in Taiwan were strongly influenced by glacial–interglacial cycles. Nevertheless, there are relatively few studies demonstrating such phylogeographic patterns for islands, especially in subtropical Asia. In this study, we aim to construct the genetic landscape of a philopatric stream frog Buergeria robusta by an intense and fine-scaled collection throughout the island. The deduced genetic landscape of B. robusta presented extremely high congruence with the actual topography of Taiwan. Two major lineages were found on the eastern and the western sides of Taiwan with a non-overlapping distribution, indicating the importance of the Central Mountain Range as the major biogeographic barrier. Both clades showed a strong and congruent tendency of demographic or distributional expansion in recent history based on different analyses. Population expansion of such a subtropical lowland species might be a result from a release of available habitat in post-glacial periods.</description><identifier>ISSN: 1055-7903</identifier><identifier>EISSN: 1095-9513</identifier><identifier>DOI: 10.1016/j.ympev.2011.09.022</identifier><identifier>PMID: 22019937</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Amphibian Proteins - genetics ; Animals ; Anura ; Anura - classification ; Anura - genetics ; Bayes Theorem ; Buergeria robusta ; Cytochromes b - genetics ; Demographic history ; frogs ; Genetic landscape ; Genetic Speciation ; Genetic Variation ; habitats ; Haplotypes ; Hylidae ; Island species ; islands ; landscapes ; Likelihood Functions ; Magnolia ; Mitochondrial Proteins - genetics ; Models, Genetic ; philopatry ; Phylogeny ; Phylogeography ; Sequence Analysis, DNA ; Subtropical species ; Taiwan ; topography</subject><ispartof>Molecular phylogenetics and evolution, 2012-01, Vol.62 (1), p.251-262</ispartof><rights>2011 Elsevier Inc.</rights><rights>Copyright © 2011 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c481t-e641f5c0c60bbf04094a6f000df9cb2cfaff0a5e58a321884c4589107170e6503</citedby><cites>FETCH-LOGICAL-c481t-e641f5c0c60bbf04094a6f000df9cb2cfaff0a5e58a321884c4589107170e6503</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,786,790,4043,27956,27957,27958</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22019937$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lin, Hung-Du</creatorcontrib><creatorcontrib>Chen, Ying-Rong</creatorcontrib><creatorcontrib>Lin, Si-Min</creatorcontrib><title>Strict consistency between genetic and topographic landscapes of the brown tree frog (Buergeria robusta) in Taiwan</title><title>Molecular phylogenetics and evolution</title><addtitle>Mol Phylogenet Evol</addtitle><description>[Display omitted]
► 564 brown tree frogs from 31 drainages were sequenced for phylogeographic analysis. ► The eastern and western populations showed a prominent genetic divergence. ► Genetic landscape presented extremely high congruence to the topography of Taiwan. ► Post-glacial expansion was strongly and consistently supported by different analyses.
Taiwan presents an excellent opportunity to build a phylogeographic paradigm for fine-scaled differentiation occurring within short distances on an single island. Due to the limitation of habitat availability on the island, demographic histories of species in Taiwan were strongly influenced by glacial–interglacial cycles. Nevertheless, there are relatively few studies demonstrating such phylogeographic patterns for islands, especially in subtropical Asia. In this study, we aim to construct the genetic landscape of a philopatric stream frog Buergeria robusta by an intense and fine-scaled collection throughout the island. The deduced genetic landscape of B. robusta presented extremely high congruence with the actual topography of Taiwan. Two major lineages were found on the eastern and the western sides of Taiwan with a non-overlapping distribution, indicating the importance of the Central Mountain Range as the major biogeographic barrier. Both clades showed a strong and congruent tendency of demographic or distributional expansion in recent history based on different analyses. Population expansion of such a subtropical lowland species might be a result from a release of available habitat in post-glacial periods.</description><subject>Amphibian Proteins - genetics</subject><subject>Animals</subject><subject>Anura</subject><subject>Anura - classification</subject><subject>Anura - genetics</subject><subject>Bayes Theorem</subject><subject>Buergeria robusta</subject><subject>Cytochromes b - genetics</subject><subject>Demographic history</subject><subject>frogs</subject><subject>Genetic landscape</subject><subject>Genetic Speciation</subject><subject>Genetic Variation</subject><subject>habitats</subject><subject>Haplotypes</subject><subject>Hylidae</subject><subject>Island species</subject><subject>islands</subject><subject>landscapes</subject><subject>Likelihood Functions</subject><subject>Magnolia</subject><subject>Mitochondrial Proteins - genetics</subject><subject>Models, Genetic</subject><subject>philopatry</subject><subject>Phylogeny</subject><subject>Phylogeography</subject><subject>Sequence Analysis, DNA</subject><subject>Subtropical species</subject><subject>Taiwan</subject><subject>topography</subject><issn>1055-7903</issn><issn>1095-9513</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNp9kU9v3CAQxVHVqvnTfoJKLbcmB7sDNrY55NBESVspUg9JzgjjwWG1a1zAWe23D9tNe8wJGH4P3swj5BODkgFrvq3K3WbGp5IDYyXIEjh_Q44ZSFFIwaq3-70QRSuhOiInMa4gg0KK9-SIZ42UVXtMwl0KziRq_BRdTDiZHe0xbREnOuKEyRmqp4EmP_sx6Pkxn9e5EI2eMVJvaXpE2ge_nWgKiNQGP9KzywXDiMFpGny_xKTPqZvovXZbPX0g76xeR_z4sp6Sh5vr-6ufxe3vH7-uvt8Wpu5YKrCpmRUGTAN9b6EGWevGAsBgpem5sdpa0AJFpyvOuq42tegkg5a1gI2A6pR8Pbw7B_9nwZjUxkWD62wf_RKVZJxB1wqRybNXyTxukCAaxjNaHVATfIwBrZqD2-iwy9Cea9RK_Y1F7WNRIFWOJas-v3yw9Bsc_mv-5ZCBLwfAaq_0GFxUD3f5UuR-ay66vceLA4F5ZE8Og4rG5bhwcAFNUoN3r1p4Bv8nqSA</recordid><startdate>201201</startdate><enddate>201201</enddate><creator>Lin, Hung-Du</creator><creator>Chen, Ying-Rong</creator><creator>Lin, Si-Min</creator><general>Elsevier Inc</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>201201</creationdate><title>Strict consistency between genetic and topographic landscapes of the brown tree frog (Buergeria robusta) in Taiwan</title><author>Lin, Hung-Du ; Chen, Ying-Rong ; Lin, Si-Min</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c481t-e641f5c0c60bbf04094a6f000df9cb2cfaff0a5e58a321884c4589107170e6503</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Amphibian Proteins - genetics</topic><topic>Animals</topic><topic>Anura</topic><topic>Anura - classification</topic><topic>Anura - genetics</topic><topic>Bayes Theorem</topic><topic>Buergeria robusta</topic><topic>Cytochromes b - genetics</topic><topic>Demographic history</topic><topic>frogs</topic><topic>Genetic landscape</topic><topic>Genetic Speciation</topic><topic>Genetic Variation</topic><topic>habitats</topic><topic>Haplotypes</topic><topic>Hylidae</topic><topic>Island species</topic><topic>islands</topic><topic>landscapes</topic><topic>Likelihood Functions</topic><topic>Magnolia</topic><topic>Mitochondrial Proteins - genetics</topic><topic>Models, Genetic</topic><topic>philopatry</topic><topic>Phylogeny</topic><topic>Phylogeography</topic><topic>Sequence Analysis, DNA</topic><topic>Subtropical species</topic><topic>Taiwan</topic><topic>topography</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lin, Hung-Du</creatorcontrib><creatorcontrib>Chen, Ying-Rong</creatorcontrib><creatorcontrib>Lin, Si-Min</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular phylogenetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lin, Hung-Du</au><au>Chen, Ying-Rong</au><au>Lin, Si-Min</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Strict consistency between genetic and topographic landscapes of the brown tree frog (Buergeria robusta) in Taiwan</atitle><jtitle>Molecular phylogenetics and evolution</jtitle><addtitle>Mol Phylogenet Evol</addtitle><date>2012-01</date><risdate>2012</risdate><volume>62</volume><issue>1</issue><spage>251</spage><epage>262</epage><pages>251-262</pages><issn>1055-7903</issn><eissn>1095-9513</eissn><notes>http://dx.doi.org/10.1016/j.ympev.2011.09.022</notes><notes>ObjectType-Article-1</notes><notes>SourceType-Scholarly Journals-1</notes><notes>ObjectType-Feature-2</notes><notes>content type line 23</notes><abstract>[Display omitted]
► 564 brown tree frogs from 31 drainages were sequenced for phylogeographic analysis. ► The eastern and western populations showed a prominent genetic divergence. ► Genetic landscape presented extremely high congruence to the topography of Taiwan. ► Post-glacial expansion was strongly and consistently supported by different analyses.
Taiwan presents an excellent opportunity to build a phylogeographic paradigm for fine-scaled differentiation occurring within short distances on an single island. Due to the limitation of habitat availability on the island, demographic histories of species in Taiwan were strongly influenced by glacial–interglacial cycles. Nevertheless, there are relatively few studies demonstrating such phylogeographic patterns for islands, especially in subtropical Asia. In this study, we aim to construct the genetic landscape of a philopatric stream frog Buergeria robusta by an intense and fine-scaled collection throughout the island. The deduced genetic landscape of B. robusta presented extremely high congruence with the actual topography of Taiwan. Two major lineages were found on the eastern and the western sides of Taiwan with a non-overlapping distribution, indicating the importance of the Central Mountain Range as the major biogeographic barrier. Both clades showed a strong and congruent tendency of demographic or distributional expansion in recent history based on different analyses. Population expansion of such a subtropical lowland species might be a result from a release of available habitat in post-glacial periods.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>22019937</pmid><doi>10.1016/j.ympev.2011.09.022</doi><tpages>12</tpages></addata></record> |
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| subjects | Amphibian Proteins - genetics Animals Anura Anura - classification Anura - genetics Bayes Theorem Buergeria robusta Cytochromes b - genetics Demographic history frogs Genetic landscape Genetic Speciation Genetic Variation habitats Haplotypes Hylidae Island species islands landscapes Likelihood Functions Magnolia Mitochondrial Proteins - genetics Models, Genetic philopatry Phylogeny Phylogeography Sequence Analysis, DNA Subtropical species Taiwan topography |
| title | Strict consistency between genetic and topographic landscapes of the brown tree frog (Buergeria robusta) in Taiwan |
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