Gene expression correlations in human cancer cell lines define molecular interaction networks for epithelial phenotype by Kohn, Kurt W, Zeeberg, Barry M, Reinhold, William C, Pommier, Yves

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High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variab... by Zeeberg, Barry R, Qin, Haiying, Narasimhan, Sudarshan, Sunshine, Margot, Cao, Hong, Kane, David W, Reimers, Mark, Stephens, Robert M, Bryant, David, Burt, Stanley K, Elnekave, Eldad, Hari, Danielle M, Wynn, Thomas A, Cunningham-Rundles, Charlotte, Stewart, Donn M, Nelson, David, Weinstein, John N

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VennMaster: area-proportional Euler diagrams for functional GO analysis of microarrays by Kestler, Hans A, Müller, André, Kraus, Johann M, Buchholz, Malte, Gress, Thomas M, Liu, Hongfang, Kane, David W, Zeeberg, Barry R, Weinstein, John N

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GoMiner: a resource for biological interpretation of genomic and proteomic data by Zeeberg, Barry R, Feng, Weimin, Wang, Geoffrey, Wang, May D, Fojo, Anthony T, Sunshine, Margot, Narasimhan, Sudarshan, Kane, David W, Reinhold, William C, Lababidi, Samir, Bussey, Kimberly J, Riss, Joseph, Barrett, J Carl, Weinstein, John N

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A Bioinformatics-Based Alternative mRNA Splicing Code that May Explain Some Disease Mutations Is Conserved in Animals by Qu, Wen, Cingolani, Pablo, Zeeberg, Barry R, Ruden, Douglas M

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Mistaken identifiers: gene name errors can be introduced inadvertently when using Excel in bioinformatics by Zeeberg, Barry R, Riss, Joseph, Kane, David W, Bussey, Kimberly J, Uchio, Edward, Linehan, W Marston, Barrett, J Carl, Weinstein, John N

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The p53 tumor suppressor network is a key responder to microenvironmental components of chronic inflammatory stress by STAIB, Frank, ROBLES, Ana I, GALLE, Peter R, HARRIS, Curtis C, VARTICOVSKI, Lyuba, WANG, Xin W, ZEEBERG, Barry R, SIROTIN, Michail, ZHURKIN, Victor B, HOFSETH, Lorne J, HUSSAIN, S. Perwez, WEINSTEIN, John N

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Analysis of ATP-Binding Cassette Transporter Expression in Drug-Selected Cell Lines by a Microarray Dedicated to Multidrug Resistance by Annereau, Jean-Philippe, Szakács, Gergely, Tucker, Charles J, Arciello, Angela, Cardarelli, Carol, Collins, Jennifer, Grissom, Sherry, Zeeberg, Barry R, Reinhold, William, Weinstein, John N, Pommier, Yves, Paules, Richard S, Gottesman, Michael M

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Generation and Initial Analysis of More Than 15,000 Full-Length Human and Mouse cDNA Sequences by Strausberg, Robert L, Feingold, Elise A, Grouse, Lynette H, Derge, Jeffery G, Klausner, Richard D, Collins, Francis S, Wagner, Lukas, Shenmen, Carolyn M, Schuler, Gregory D, Altschul, Stephen F, Zeeberg, Barry, Buetow, Kenneth H, Schaefer, Carl F, Bhat, Narayan K, Hopkins, Ralph F, Jordan, Heather, Moore, Troy, Max, Steve I, Wang, Jun, Hsieh, Florence, Diatchenko, Luda, Marusina, Kate, Farmer, Andrew A, Rubin, Gerald M, Hong, Ling, Stapleton, Mark, Soares, M Bento, Bonaldo, Maria F, Casavant, Tom L, Scheetz, Todd E, Brownstein, Michael J, Usdin, Ted B, Toshiyuki, Shiraki, Carninci, Piero, Prange, Christa, Raha, Sam S, Loquellano, Naomi A, Peters, Garrick J, Abramson, Rick D, Mullahy, Sara J, Bosak, Stephanie A, McEwan, Paul J, McKernan, Kevin J, Malek, Joel A, Gunaratne, Preethi H, Richards, Stephen, Worley, Kim C, Hale, Sarah, Garcia, Angela M, Gay, Laura J, Hulyk, Stephen W, Villalon, Debbie K, Muzny, Donna M, Sodergren, Erica J, Lu, Xiuhua, Gibbs, Richard A, Fahey, Jessica, Helton, Erin, Ketteman, Mark, Madan, Anuradha, Rodrigues, Stephanie, Sanchez, Amy, Whiting, Michelle, Madan, Anup, Young, Alice C, Shevchenko, Yuriy, Bouffard, Gerard G, Blakesley, Robert W, Touchman, Jeffrey W, Green, Eric D, Dickson, Mark C, Rodriguez, Alex C, Grimwood, Jane, Schmutz, Jeremy, Myers, Richard M, Butterfield, Yaron S N, Krzywinski, Martin I, Skalska, Ursula, Smailus, Duane E, Schnerch, Angelique, Schein, Jacqueline E, Jones, Steven J M, Marra, Marco A

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Sequencing and analysis of 10,967 full-length cDNA clones from Xenopus laevis and Xenopus tropicalis reveals post-tetraploidization transcriptome remodeling by Morin, Ryan D, Chang, Elbert, Petrescu, Anca, Liao, Nancy, Griffith, Malachi, Chow, William, Kirkpatrick, Robert, Butterfield, Yaron S, Young, Alice C, Stott, Jeffrey, Barber, Sarah, Babakaiff, Ryan, Dickson, Mark C, Matsuo, Corey, Wong, David, Yang, George S, Smailus, Duane E, Wetherby, Keith D, Kwong, Peggy N, Grimwood, Jane, Brinkley, 3rd, Charles P, Brown-John, Mabel, Reddix-Dugue, Natalie D, Mayo, Michael, Schmutz, Jeremy, Beland, Jaclyn, Park, Morgan, Gibson, Susan, Olson, Teika, Bouffard, Gerard G, Tsai, Miranda, Featherstone, Ruth, Chand, Steve, Siddiqui, Asim S, Jang, Wonhee, Lee, Ed, Klein, Steven L, Blakesley, Robert W, Zeeberg, Barry R, Narasimhan, Sudarshan, Weinstein, John N, Pennacchio, Christa Prange, Myers, Richard M, Green, Eric D, Wagner, Lukas, Gerhard, Daniela S, Marra, Marco A, Jones, Steven J M, Holt, Robert A

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Ontogenomic study of the relationship between number of gene splice variants and GO categorization by Kahn, Ari B., Zeeberg, Barry R., Ryan, Michael C., Jamison, D. Curtis, Rockoff, David M., Pommier, Yves, Weinstein, John N.

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The EDGE hypothesis: Epigenetically directed genetic errors in repeat-containing proteins (RCPs) involved in evolution, neuroendocrine signaling, and cancer by Ruden, Douglas M, Jamison, D. Curtis, Zeeberg, Barry R, Garfinkel, Mark D, Weinstein, John N, Rasouli, Parsa, Lu, Xiangyi

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MatchMiner: a tool for batch navigation among gene and gene product identifiers by Bussey, Kimberly J, Kane, David, Sunshine, Margot, Narasimhan, Sudar, Nishizuka, Satoshi, Reinhold, William C, Zeeberg, Barry, Ajay, Weinstein, Weinstein, John N

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Inhibition of microtubule assembly by phosphorylation of microtubule-associated proteins by Jameson, Larry, Frey, Tom, Zeeberg, Barry, Dalldorf, Fred, Caplow, Michael

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Characterization of in vivo brain muscarinic acetylcholine receptor subtype selectivity by competition studies against (R,S)-[125I]QNB by Gitler, Miriam S., Boulay, Sheila F., Sood, Virendar K., McPherson, Dan W., (Russ) Knap, F.F., Zeeberg, Barry R., Reba, Richard C.

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3-D computer simulations of resolution effects of multidetector point focusing SPECT imaging by Kim, H.-J., Zeeberg, B.R., Loew, M.H., Reba, R.C.

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Determination of free and bound microtubular protein and guanine nucleotide under equilibrium conditions by Zeeberg, Barry, Caplow, Michael

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Transition State Charge Distribution in Reactions of an Acetyltyrosylchymotrypsin Intermediate by Zeeberg, B, Caplow, M

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Efficient algorithm for reconstruction of SPECT images in the presence of spatially varying attenuation by Zeeberg, B R, Soucaille, J F, Carson, R, Bacharach, S, Green, M V, Larson, S M

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Exchange of tubulin dimer into rings in microtubule assembly-disassembly by Zeeberg, Barry, Cheek, Jeffrey, Caplow, Michael

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