Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments by Van Valen, David A, Kudo, Takamasa, Lane, Keara M, Macklin, Derek N, Quach, Nicolas T, DeFelice, Mialy M, Maayan, Inbal, Tanouchi, Yu, Ashley, Euan A, Covert, Markus W

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Abstract 2526: Everything as code by Van Valen, David

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Single-cell metabolic profiling of human cytotoxic T cells by Hartmann, Felix J, Mrdjen, Dunja, McCaffrey, Erin, Glass, David R, Greenwald, Noah F, Bharadwaj, Anusha, Khair, Zumana, Verberk, Sanne G S, Baranski, Alex, Baskar, Reema, Graf, William, Van Valen, David, Van den Bossche, Jan, Angelo, Michael, Bendall, Sean C

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Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning by Greenwald, Noah F, Miller, Geneva, Moen, Erick, Kong, Alex, Kagel, Adam, Dougherty, Thomas, Fullaway, Christine Camacho, McIntosh, Brianna J, Leow, Ke Xuan, Schwartz, Morgan Sarah, Pavelchek, Cole, Cui, Sunny, Camplisson, Isabella, Bar-Tal, Omer, Singh, Jaiveer, Fong, Mara, Chaudhry, Gautam, Abraham, Zion, Moseley, Jackson, Warshawsky, Shiri, Soon, Erin, Greenbaum, Shirley, Risom, Tyler, Hollmann, Travis, Bendall, Sean C, Keren, Leeat, Graf, William, Angelo, Michael, Van Valen, David

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A Structured Tumor-Immune Microenvironment in Triple Negative Breast Cancer Revealed by Multiplexed Ion Beam Imaging by Keren, Leeat, Bosse, Marc, Marquez, Diana, Angoshtari, Roshan, Jain, Samir, Varma, Sushama, Yang, Soo-Ryum, Kurian, Allison, Van Valen, David, West, Robert, Bendall, Sean C., Angelo, Michael

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A Single-Molecule Hershey-Chase Experiment by Van Valen, David, Wu, David, Chen, Yi-Ju, Tuson, Hannah, Wiggins, Paul, Phillips, Rob

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Measuring Signaling and RNA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NF-κB Activation by Lane, Keara, Van Valen, David, DeFelice, Mialy M., Macklin, Derek N., Kudo, Takamasa, Jaimovich, Ariel, Carr, Ambrose, Meyer, Tobias, Pe'er, Dana, Boutet, Stéphane C., Covert, Markus W.

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A promoter-level mammalian expression atlas by Kawaji, Hideya, Rehli, Michael, de Hoon, Michiel J L, Haberle, Vanja, Kulakovskiy, Ivan V, Itoh, Masayoshi, Andersson, Robin, Schmeier, Sebastian, Schaefer, Ulf, Medvedeva, Yulia A, Plessy, Charles, Vitezic, Morana, Severin, Jessica, Young, Robert S, Alam, Intikhab, Albanese, Davide, Archer, John A C, Arner, Peter, Rennie, Sarah, Blake, Judith A, Blumenthal, Antje, Bodega, Beatrice, Bonetti, Alessandro, Brombacher, Frank, Chen, Yun, Chierici, Marco, Davis, Carrie A, Diehl, Alexander D, Dohi, Taeko, Edinger, Matthias, Ekwall, Karl, Endoh, Mitsuhiro, Fang, Hai, Faulkner, Geoffrey J, Fujita, Rie, Fukuda, Shiro, Furlanello, Cesare, Furino, Masaaki, Goldowitz, Daniel, Gough, Julian, Guhl, Sven, Hara, Mitsuko, Harbers, Matthias, Herlyn, Meenhard, Iida, Kei, Jankovic, Boris R, Joshi, Anagha, Katayama, Shintaro, Kawamoto, Hiroshi, Kempfle, Judith S, Kenna, Tony J, Kere, Juha, Knox, Alan J, Kojima, Miki, Kondo, Naoto, Kubosaki, Atsutaka, Laros, Jeroen F J, Lee, Weonju, Mathelier, Anthony, Mizuno, Yosuke, Morimoto, Mitsuru, Motakis, Efthymios, Mummery, Christine L, Nakamura, Toshiyuki, Nakamura, Yukio, Noma, Shohei, Ogishima, Soichi, Ohimiya, Hiroko, Okazaki, Yasushi, Piazza, Silvano, Ravasi, Timothy, Roy, Sugata, Rye, Morten B, Saijyo, Eri, Saka, Akiko, Sakaguchi, Shimon, Shimoji, Hisashi, Shimoni, Yishai, Simon, Christophe, Suzuki, Naoko, Swoboda, Rolf K, 't Hoen, Peter A C, Tanaka, Hiroshi, Tatsukawa, Hideki, Tatum, Zuotian, Toyodo, Hiroo, Wasserman, Wyeth W, Wells, Christine A, Yonekura, Yohei, Zhang, Peter G, Zucchelli, Silvia, Suzuki, Harukazu, Daub, Carsten O, Heutink, Peter, Hide, Winston, Freeman, Tom C, Bajic, Vladimir B, Taylor, Martin S, Makeev, Vsevolod J, Sandelin, Albin

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Mega-Analysis of Gray Matter Volume in Substance Dependence: General and Substance-Specific Regional Effects by Mackey, Scott, Allgaier, Nicholas, Chaarani, Bader, Spechler, Philip, Orr, Catherine, Bunn, Janice, Allen, Nicholas B, Alia-Klein, Nelly, Batalla, Albert, Blaine, Sara, Brooks, Samantha, Caparelli, Elisabeth, Chye, Yann Ying, Cousijn, Janna, Dagher, Alain, Desrivieres, Sylvane, Feldstein-Ewing, Sarah, Foxe, John J, Goldstein, Rita Z, Goudriaan, Anna E, Heitzeg, Mary M, Hester, Robert, Hutchison, Kent, Korucuoglu, Ozlem, Li, Chiang-Shan R, London, Edythe, Lorenzetti, Valentina, Luijten, Maartje, Martin-Santos, Rocio, May, April, Momenan, Reza, Morales, Angelica, Paulus, Martin P, Pearlson, Godfrey, Rousseau, Marc-Etienne, Salmeron, Betty Jo, Schluter, Renée, Schmaal, Lianne, Schumann, Gunter, Sjoerds, Zsuzsika, Stein, Dan J, Stein, Elliot A, Sinha, Rajita, Solowij, Nadia, Tapert, Susan, Uhlmann, Anne, Veltman, Dick, van Holst, Ruth, Whittle, Sarah, Wiers, Reinout, Wright, Margaret J, Yücel, Murat, Zhang, Sheng, Yurgelun-Todd, Deborah, Hibar, Derrek P, Jahanshad, Neda, Evans, Alan, Thompson, Paul M, Glahn, David C, Conrod, Patricia, Garavan, Hugh

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A spatially resolved timeline of the human maternal-fetal interface by Greenbaum, Shirley, Averbukh, Inna, Soon, Erin, Rizzuto, Gabrielle, Baranski, Alex, Greenwald, Noah F, Kagel, Adam, Bosse, Marc, Jaswa, Eleni G, Khair, Zumana, Kwok, Shirley, Warshawsky, Shiri, Piyadasa, Hadeesha, Goldston, Mako, Spence, Angie, Miller, Geneva, Schwartz, Morgan, Graf, Will, Van Valen, David, Winn, Virginia D, Hollmann, Travis, Keren, Leeat, van de Rijn, Matt, Angelo, Michael

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Biochemistry on a Leash: The Roles of Tether Length and Geometry in Signal Integration Proteins by Van Valen, David, Haataja, Mikko, Phillips, Rob

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Ion-Dependent Dynamics of DNA Ejections for Bacteriophage l by Wu, David, Van Valen, David, Hu, Qicong, Phillips, Rob

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Ion-Dependent Dynamics of DNA Ejections for Bacteriophage λ by Wu, David, Van Valen, David, Hu, Qicong, Phillips, Rob

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Dispelling myths about drug procurement policy by van Valen, Marcel, Jamieson, David, Parvin, Lisa, Ramirez, Cherie L

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A microwell platform for high-throughput longitudinal phenotyping and selective retrieval of organoids by Sockell, Alexandra, Wong, Wing, Longwell, Scott, Vu, Thy, Karlsson, Kasper, Mokhtari, Daniel, Schaepe, Julia, Lo, Yuan-Hung, Cornelius, Vincent, Kuo, Calvin, Van Valen, David, Curtis, Christina, Fordyce, Polly M.

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Ion-Dependent Dynamics of DNA Ejections for Bacteriophage by Wu, David, Van Valen, David, Hu, Qicong, Phillips, Rob

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Measuring Signaling and RNA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NF-κB Activation by Lane, Keara, Van Valen, David, DeFelice, Mialy M., Macklin, Derek N., Kudo, Takamasa, Jaimovich, Ariel, Carr, Ambrose, Meyer, Tobias, Pe'er, Dana, Boutet, Stéphane C., Covert, Markus W.

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Denosumab treatment effects on structural damage, bone mineral density, and bone turnover in rheumatoid arthritis: A twelve‐month, multicenter, randomized, double‐blind, placebo‐co... by Cohen, Stanley B., Dore, Robin K., Lane, Nancy E., Ory, Peter A., Peterfy, Charles G., Sharp, John T., van der Heijde, Désirée, Zhou, Lifen, Tsuji, Wayne, Newmark, Richard

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Sizing-up the brain by Jones, David

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Hydroxamate-Stimulated O 2 Uptake in Roots of Pisum sativum and Zea mays , Mediated by a Peroxidase: Its Consequences for Respiration Measurements by Brouwer, Koos Spreen, van Valen, Ties, Day, David A., Lambers, Hans

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