The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources

by Ruzicka, Leyla, Howe, Douglas G, Ramachandran, Sridhar, Toro, Sabrina, Van Slyke, Ceri E, Bradford, Yvonne M, Eagle, Anne, Fashena, David, Frazer, Ken, Kalita, Patrick, Mani, Prita, Martin, Ryan, Moxon, Sierra Taylor, Paddock, Holly, Pich, Christian, Schaper, Kevin, Shao, Xiang, Singer, Amy, Westerfield, Monte
Published in Nucleic acids research

A unified anatomy ontology of the vertebrate skeletal system

by Dahdul, Wasila M, Balhoff, James P, Blackburn, David C, Diehl, Alexander D, Haendel, Melissa A, Hall, Brian K, Lapp, Hilmar, Lundberg, John G, Mungall, Christopher J, Ringwald, Martin, Segerdell, Erik, Van Slyke, Ceri E, Vickaryous, Matthew K, Westerfield, Monte, Mabee, Paula M
Published in PloS one

ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics

by Howe, Douglas G, Bradford, Yvonne M, Conlin, Tom, Eagle, Anne E, Fashena, David, Frazer, Ken, Knight, Jonathan, Mani, Prita, Martin, Ryan, Moxon, Sierra A Taylor, Paddock, Holly, Pich, Christian, Ramachandran, Sridhar, Ruef, Barbara J, Ruzicka, Leyla, Schaper, Kevin, Shao, Xiang, Singer, Amy, Sprunger, Brock, Van Slyke, Ceri E, Westerfield, Monte
Published in Nucleic acids research

The Zebrafish Information Network: major gene page and home page updates

by Howe, Douglas G, Ramachandran, Sridhar, Bradford, Yvonne M, Fashena, David, Toro, Sabrina, Eagle, Anne, Frazer, Ken, Kalita, Patrick, Mani, Prita, Martin, Ryan, Moxon, Sierra Taylor, Paddock, Holly, Pich, Christian, Ruzicka, Leyla, Schaper, Kevin, Shao, Xiang, Singer, Amy, Van Slyke, Ceri E, Westerfield, Monte
Published in Nucleic acids research

The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability

by Diehl, Alexander D, Meehan, Terrence F, Bradford, Yvonne M, Brush, Matthew H, Dahdul, Wasila M, Dougall, David S, He, Yongqun, Osumi-Sutherland, David, Ruttenberg, Alan, Sarntivijai, Sirarat, Van Slyke, Ceri E, Vasilevsky, Nicole A, Haendel, Melissa A, Blake, Judith A, Mungall, Christopher J
Published in Journal of biomedical semantics

The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio

by Van Slyke, Ceri E, Bradford, Yvonne M, Westerfield, Monte, Haendel, Melissa A
Published in Journal of biomedical semantics

Zebrafish information network, the knowledgebase for Danio rerio research

by Bradford, Yvonne M, Van Slyke, Ceri E, Ruzicka, Leyla, Singer, Amy, Eagle, Anne, Fashena, David, Howe, Douglas G, Frazer, Ken, Martin, Ryan, Paddock, Holly, Pich, Christian, Ramachandran, Sridhar, Westerfield, Monte
Published in Genetics (Austin)

From multiallele fish to nonstandard environments, how ZFIN assigns phenotypes, human disease models, and gene expression annotations to genes

by Bradford, Yvonne M, Van Slyke, Ceri E, Howe, Douglas G, Fashena, David, Frazer, Ken, Martin, Ryan, Paddock, Holly, Pich, Christian, Ramachandran, Sridhar, Ruzicka, Leyla, Singer, Amy, Taylor, Ryan, Tseng, Wei-Chia, Westerfield, Monte
Published in Genetics (Austin)

The Zebrafish Information Network: the zebrafish model organism database

by Sprague, Judy, Bayraktaroglu, Leyla, Clements, Dave, Conlin, Tom, Fashena, David, Frazer, Ken, Haendel, Melissa, Howe, Douglas G., Mani, Prita, Ramachandran, Sridhar, Schaper, Kevin, Segerdell, Erik, Song, Peiran, Sprunger, Brock, Taylor, Sierra, Van Slyke, Ceri E., Westerfield, Monte
Published in Nucleic acids research

Automated generation of gene summaries at the Alliance of Genome Resources

by Kishore, Ranjana, Arnaboldi, Valerio, Van Slyke, Ceri E, Chan, Juancarlos, Nash, Robert S, Urbano, Jose M, Dolan, Mary E, Engel, Stacia R, Shimoyama, Mary, Sternberg, Paul W, Genome Resources, the Alliance of
Published in Database : the journal of biological databases and curation

The Zebrafish Information Network: the zebrafish model organism database provides expanded support for genotypes and phenotypes

by Sprague, Judy, Bayraktaroglu, Leyla, Bradford, Yvonne, Conlin, Tom, Dunn, Nathan, Fashena, David, Frazer, Ken, Haendel, Melissa, Howe, Douglas G., Knight, Jonathan, Mani, Prita, Moxon, Sierra A.T., Pich, Christian, Ramachandran, Sridhar, Schaper, Kevin, Segerdell, Erik, Shao, Xiang, Singer, Amy, Song, Peiran, Sprunger, Brock, Van Slyke, Ceri E., Westerfield, Monte
Published in Nucleic acids research

Alliance of Genome Resources Portal: unified model organism research platform

by Agapite, Julie, Albou, Laurent-Philippe, Aleksander, Suzi, Argasinska, Joanna, Arnaboldi, Valerio, Attrill, Helen, Bello, Susan M, Blake, Judith A, Blodgett, Olin, Bradford, Yvonne M, Bult, Carol J, Cain, Scott, Calvi, Brian R, Carbon, Seth, Chan, Juancarlos, Chen, Wen J, Cherry, J Michael, Cho, Jaehyoung, Christie, Karen R, Crosby, Madeline A, Pons, Jeff De, Dolan, Mary E, Santos, Gilberto dos, Dunn, Barbara, Dunn, Nathan, Eagle, Anne, Ebert, Dustin, Engel, Stacia R, Fashena, David, Frazer, Ken, Gao, Sibyl, Gondwe, Felix, Goodman, Josh, Gramates, L Sian, Grove, Christian A, Harris, Todd, Harrison, Marie-Claire, Howe, Douglas G, Howe, Kevin L, Jha, Sagar, Kadin, James A, Kaufman, Thomas C, Kalita, Patrick, Karra, Kalpana, Kishore, Ranjana, Laulederkind, Stan, Lee, Raymond, MacPherson, Kevin A, Marygold, Steven J, Matthews, Beverley, Millburn, Gillian, Miyasato, Stuart, Moxon, Sierra, Mueller, Hans-Michael, Mungall, Christopher, Muruganujan, Anushya, Mushayahama, Tremayne, Nash, Robert S, Ng, Patrick, Paulini, Michael, Perrimon, Norbert, Pich, Christian, Raciti, Daniela, Richardson, Joel E, Russell, Matthew, Gelbart, Susan Russo, Ruzicka, Leyla, Schaper, Kevin, Shimoyama, Mary, Simison, Matt, Smith, Cynthia, Shaw, David R, Shrivatsav, Ajay, Skrzypek, Marek, Smith, Jennifer R, Sternberg, Paul W, Tabone, Christopher J, Thomas, Paul D, Thota, Jyothi, Toro, Sabrina, Tomczuk, Monika, Tutaj, Marek, Tutaj, Monika, Urbano, Jose-Maria, Auken, Kimberly Van, Slyke, Ceri E Van, Wang, Shur-Jen, Weng, Shuai, Westerfield, Monte, Williams, Gary, Wong, Edith D, Wright, Adam, Yook, Karen
Published in Nucleic acids research

Harmonizing model organism data in the Alliance of Genome Resources

by Albou, Laurent-Philippe, Alexander, Micheal, Antonazzo, Giulia, Argasinska, Joanna, Arnaboldi, Valerio, Attrill, Helen, Becerra, Andrés, Bello, Susan M, Blake, Judith A, Blodgett, Olin, Cain, Scott, Calvi, Brian R, Carbon, Seth, Chan, Juancarlos, Chen, Wen J, Michael Cherry, J, Crosby, Madeline A, da Veiga Beltrame, Eduardo, De Pons, Jeffrey L, D’Eustachio, Peter, Diamantakis, Stavros, dos Santos, Gilberto, Douglass, Eric, Eagle, Anne, Engel, Stacia R, Fashena, David, Foley, Saoirse, Frazer, Ken, Gao, Sibyl, Gibson, Adam C, Gondwe, Felix, Goodman, Josh, Sian Gramates, L, Grove, Christian A, Hale, Paul, Harris, Todd, Thomas Hayman, G, Hill, David P, Howe, Douglas G, Howe, Kevin L, Hu, Yanhui, Jha, Sagar, Kadin, James A, Kalita, Patrick, Karra, Kalpana, Kishore, Ranjana, Lee, Raymond, Longden, Ian, Luypaert, Manuel, MacPherson, Kevin A, Martin, Ryan, Marygold, Steven J, Matthews, Beverley, McAndrews, Monica S, Millburn, Gillian, Miyasato, Stuart, Motenko, Howie, Muller, Hans-Michael, Mungall, Christopher J, Nash, Robert S, Ng, Patrick, Nuin, Paulo, Paddock, Holly, Paulini, Michael, Perrimon, Norbert, Quinton-Tulloch, Mark, Raciti, Daniela, Ramachandran, Sridhar, Richardson, Joel E, Gelbart, Susan Russo, Schaper, Kevin, Schindelman, Gary, Shimoyama, Mary, Shrivatsav, Ajay, Skrzypek, Marek, Smith, Constance M, Smith, Cynthia L, Smith, Jennifer R, Stein, Lincoln, Tabone, Christopher J, Thomas, Paul D, Thorat, Ketaki, Thota, Jyothi, Toro, Sabrina, Tomczuk, Monika, Tutaj, Marek A, Tutaj, Monika, Urbano, Jose-Maria, Van Auken, Kimberly, Van Slyke, Ceri E, Wang, Shur-Jen, Weng, Shuai, Westerfield, Monte, Williams, Gary, Wilming, Laurens G, Wong, Edith D, Wright, Adam, Yook, Karen, Zarowiecki, Magdalena, Zhou, Pinglei
Published in Genetics (Austin)

Updates to the Alliance of Genome Resources Central Infrastructure

by Alliance of Genome Resources Consortium
Published in Genetics (Austin)

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task

by Arighi, Cecilia N, Carterette, Ben, Cohen, K Bretonnel, Krallinger, Martin, Wilbur, W John, Fey, Petra, Dodson, Robert, Cooper, Laurel, Van Slyke, Ceri E, Dahdul, Wasila, Mabee, Paula, Li, Donghui, Harris, Bethany, Gillespie, Marc, Jimenez, Silvia, Roberts, Phoebe, Matthews, Lisa, Becker, Kevin, Drabkin, Harold, Bello, Susan, Licata, Luana, Chatr-aryamontri, Andrew, Schaeffer, Mary L, Park, Julie, Haendel, Melissa, Van Auken, Kimberly, Li, Yuling, Chan, Juancarlos, Muller, Hans-Michael, Cui, Hong, Balhoff, James P, Chi-Yang Wu, Johnny, Lu, Zhiyong, Wei, Chih-Hsuan, Tudor, Catalina O, Raja, Kalpana, Subramani, Suresh, Natarajan, Jeyakumar, Cejuela, Juan Miguel, Dubey, Pratibha, Wu, Cathy
Published in Database : the journal of biological databases and curation

Harmonizing model organism data in the Alliance of Genome Resources

by Agapite, Julie, Albou, Laurent-Philippe, Aleksander, Suzanne A., Anagnostopoulos, Anna V., Antonazzo, Giulia, Argasinska, Joanna, Attrill, Helen, Becerra, Andrés, Bello, Susan M., Blake, Judith A., Blodgett, Olin, Bradford, Yvonne M., Bult, Carol J., Cain, Scott, Calvi, Brian R., Carbon, Seth, Chen, Wen J., Cho, Jaehyoung, Christie, Karen R., Crosby, Madeline A., Davis, Paul, da Veiga Beltrame, Eduardo, D’Eustachio, Peter, Diamantakis, Stavros, Dolan, Mary E., Douglass, Eric, Dunn, Barbara, Eagle, Anne, Engel, Stacia R., Foley, Saoirse, Frazer, Ken, Gao, Sibyl, Gondwe, Felix, Goodman, Josh, Sian Gramates, L., Grove, Christian A., Hale, Paul, Harris, Todd, Thomas Hayman, G., Hill, David P., Howe, Douglas G., Howe, Kevin L., Hu, Yanhui, Kaufman, Thomas C., Karra, Kalpana, Kishore, Ranjana, Kwitek, Anne E., Lee, Raymond, Longden, Ian, Luypaert, Manuel, MacPherson, Kevin A., Martin, Ryan, Marygold, Steven J., Matthews, Beverley, McAndrews, Monica S., Miyasato, Stuart, Motenko, Howie, Muller, Hans-Michael, Mungall, Christopher J., Muruganujan, Anushya, Mushayahama, Tremayne, Nalabolu, Harika S., Nash, Robert S., Ng, Patrick, Paulini, Michael, Perrimon, Norbert, Raciti, Daniela, Ramachandran, Sridhar, Richardson, Joel E., Gelbart, Susan Russo, Ruzicka, Leyla, Schaper, Kevin, Schindelman, Gary, Shimoyama, Mary, Shrivatsav, Ajay, Singer, Amy, Skrzypek, Marek, Smith, Constance M., Smith, Cynthia L., Smith, Jennifer R., Stein, Lincoln, Sternberg, Paul W., Tabone, Christopher J., Thota, Jyothi, Tomczuk, Monika, Tutaj, Marek A., Urbano, Jose-Maria, Van Auken, Kimberly, Van Slyke, Ceri E., Wang, Qinghua, Wang, Shur-Jen, Weng, Shuai, Westerfield, Monte, Williams, Gary, Wilming, Laurens G., Wong, Edith D., Yook, Karen, Zarowiecki, Magdalena, Zhou, Pinglei, Zytkovicz, Mark
Published in Genetics (Austin)

The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability

by Diehl, Alexander D., Meehan, Terrence F., Bradford, Yvonne M., Brush, Matthew H., Dahdul, Wasila M., Dougall, David S., He, Yongqun, Osumi-Sutherland, David, Ruttenberg, Alan, Sarntivijai, Sirarat, Van Slyke, Ceri E., Vasilevsky, Nicole A., Haendel, Melissa A., Blake, Judith A., Mungall, Christopher J.
Published in Journal of biomedical semantics