Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB

by Tripathi, Vidisha, Shen, Zhen, Chakraborty, Arindam, Giri, Sumanprava, Freier, Susan M, Wu, Xiaolin, Zhang, Yongqing, Gorospe, Myriam, Prasanth, Supriya G, Lal, Ashish, Prasanth, Kannanganattu V
Published in PLoS genetics

The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation

by Tripathi, Vidisha, Ellis, Jonathan D., Shen, Zhen, Song, David Y., Pan, Qun, Watt, Andrew T., Freier, Susan M., Bennett, C. Frank, Sharma, Alok, Bubulya, Paula A., Blencowe, Benjamin J., Prasanth, Supriya G., Prasanth, Kannanganattu V.
Published in Molecular cell

A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression

by Bernard, Delphine, Prasanth, Kannanganattu V, Tripathi, Vidisha, Colasse, Sabrina, Nakamura, Tetsuya, Xuan, Zhenyu, Zhang, Michael Q, Sedel, Frédéric, Jourdren, Laurent, Coulpier, Fanny, Triller, Antoine, Spector, David L, Bessis, Alain
Published in The EMBO journal

PAR-CLIP analysis uncovers AUF1 impact on target RNA fate and genome integrity

by Yoon, Je-Hyun, De, Supriyo, Srikantan, Subramanya, Abdelmohsen, Kotb, Grammatikakis, Ioannis, Kim, Jiyoung, Kim, Kyoung Mi, Noh, Ji Heon, White, Elizabeth J F, Martindale, Jennifer L, Yang, Xiaoling, Kang, Min-Ju, Wood, 3rd, William H, Noren Hooten, Nicole, Evans, Michele K, Becker, Kevin G, Tripathi, Vidisha, Prasanth, Kannanganattu V, Wilson, Gerald M, Tuschl, Thomas, Ingolia, Nicholas T, Hafner, Markus, Gorospe, Myriam
Published in Nature communications

SRSF1 regulates the assembly of pre-mRNA processing factors in nuclear speckles

by Tripathi, Vidisha, Song, David Y, Zong, Xinying, Shevtsov, Sergey P, Hearn, Stephen, Fu, Xiang-Dong, Dundr, Miroslav, Prasanth, Kannanganattu V
Published in Molecular biology of the cell

ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins

by Anantharaman, Aparna, Tripathi, Vidisha, Khan, Abid, Yoon, Je-Hyun, Singh, Deepak K, Gholamalamdari, Omid, Guang, Shuomeng, Ohlson, Johan, Wahlstedt, Helene, Öhman, Marie, Jantsch, Michael F, Conrad, Nicholas K, Ma, Jian, Gorospe, Myriam, Prasanth, Supriya G, Prasanth, Kannanganattu V
Published in Nucleic acids research

A cost-effective and efficient approach for generating and assembling reagents for conducting real-time PCR

by Mote, Ridim D, Laxmikant, V Shinde, Singh, Surya Bansi, Tiwari, Mahak, Singh, Hemant, Srivastava, Juhi, Tripathi, Vidisha, Seshadri, Vasudevan, Majumdar, Amitabha, Subramanyam, Deepa
Published in Journal of biosciences

RNA splicing control: Yet another gene regulatory role for long nuclear noncoding RNAs

by Zong, Xinying, Tripathi, Vidisha, Prasanth, Kannanganattu V.
Published in RNA biology

Correction to: A cost-effective and efficient approach for generating and assembling reagents for conducting real-time PCR

by Mote, Ridim D, Laxmikant V, Shinde, Singh, Surya Bansi, Tiwari, Mahak, Singh, Hemant, Srivastava, Juhi, Tripathi, Vidisha, Seshadri, Vasudevan, Majumdar, Amitabha, Subramanyam, Deepa
Published in Journal of biosciences

Paraspeckles modulate the intranuclear distribution of paraspeckle-associated Ctn RNA

by Anantharaman, Aparna, Jadaliha, Mahdieh, Tripathi, Vidisha, Nakagawa, Shinichi, Hirose, Tetsuro, Jantsch, Michael F, Prasanth, Supriya G, Prasanth, Kannanganattu V
Published in Scientific reports

The S-phase-induced lncRNA SUNO1 promotes cell proliferation by controlling YAP1/Hippo signaling pathway

by Hao, Qinyu, Zong, Xinying, Sun, Qinyu, Lin, Yo-Chuen, Song, You Jin, Hashemikhabir, Seyedsasan, Hsu, Rosaline Yc, Kamran, Mohammad, Chaudhary, Ritu, Tripathi, Vidisha, Singh, Deepak Kumar, Chakraborty, Arindam, Li, Xiao Ling, Kim, Yoon Jung, Orjalo, Arturo V, Polycarpou-Schwarz, Maria, Moriarity, Branden S, Jenkins, Lisa M, Johansson, Hans E, Zhu, Yuelin J, Diederichs, Sven, Bagchi, Anindya, Kim, Tae Hoon, Janga, Sarath C, Lal, Ashish, Prasanth, Supriya G, Prasanth, Kannanganattu V
Published in eLife

Nuclear organization and dynamics of 7SK RNA in regulating gene expression

by Prasanth, Kannanganattu V, Camiolo, Matthew, Chan, Grace, Tripathi, Vidisha, Denis, Laurence, Nakamura, Tetsuya, Hübner, Michael R, Spector, David L
Published in Molecular biology of the cell

Malat1 is not an essential component of nuclear speckles in mice

by Nakagawa, Shinichi, Ip, Joanna Y, Shioi, Go, Tripathi, Vidisha, Zong, Xinying, Hirose, Tetsuro, Prasanth, Kannanganattu V
Published in RNA (Cambridge)

Enhancement of hydrophilicity, biocompatibility and biodegradability of poly(ε-caprolactone) electrospun nanofiber scaffolds using poly(ethylene glycol) and poly(L-lactide-co-ε-cap...

by Arbade, Gajanan Kashinathrao, Srivastava, Juhi, Tripathi, Vidisha, Lenka, Nibedita, Patro, T. Umasankar
Published in Journal of biomaterials science. Polymer ed.

Weaning of mechanically ventilated chronic obstructive pulmonary disease patients by using non-invasive positive pressure ventilation: A prospective study

by Mishra, Mayank, Chaudhri, Sudhir, Tripathi, Vidisha, Verma, Ajay K, Sampath, Arun, Chauhan, Nishant K
Published in Lung India

MIR100 host gene-encoded lncRNAs regulate cell cycle by modulating the interaction between HuR and its target mRNAs

by Sun, Qinyu, Tripathi, Vidisha, Yoon, Je-Hyun, Singh, Deepak K, Hao, Qinyu, Min, Kyung-Won, Davila, Sylvia, Zealy, Richard W, Li, Xiao Ling, Polycarpou-Schwarz, Maria, Lehrmann, Elin, Zhang, Yongqing, Becker, Kevin G, Freier, Susan M, Zhu, Yuelin, Diederichs, Sven, Prasanth, Supriya G, Lal, Ashish, Gorospe, Myriam, Prasanth, Kannanganattu V
Published in Nucleic acids research

Effect of poly(ethylene glycol) on drug delivery, antibacterial, biocompatible, physico-chemical and thermo-mechanical properties of PCL-chloramphenicol electrospun nanofiber scaff...

by Arbade, Gajanan Kashinathrao, Dongardive, Vikas, Rath, Sangram K., Tripathi, Vidisha, Patro, T. Umasankar
Published in International journal of polymeric materials

Antagonism between splicing and microprocessor complex dictates the serum-induced processing of lnc- MIRHG for efficient cell cycle reentry

by Sun, Qinyu, Hao, Qinyu, Lin, Yo-Chuen, Song, You Jin, Bangru, Sushant, Arif, Waqar, Tripathi, Vidisha, Zhang, Yang, Cho, Jung-Hyun, Freier, Susan M, Jenkins, Lisa M, Ma, Jian, Yoon, Je-Hyun, Kalsotra, Auinash, Lal, Ashish, Prasanth, Supriya G, Prasanth, Kannanganattu V
Published in RNA (Cambridge)

Identification of Wnt4 as the ovary pathway gene and temporal disparity of its expression vis-a-vis testis genes in the garden lizard, Calotes versicolor

by Tripathi, Vidisha, Raman, Rajiva
Published in Gene

Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping

by Ramilowski, Jordan A., Yip, Chi Wai, Agrawal, Saumya, Chang, Jen-Chien, Kulakovskiy, Ivan V., Mendez, Mickaël, Ooi, Jasmine Li Ching, Parkinson, Nick, Petri, Andreas, Roos, Leonie, Severin, Jessica, Yasuzawa, Kayoko, Akalin, Altuna, Antonov, Ivan V., Arner, Erik, Bonetti, Alessandro, Bono, Hidemasa, Borsari, Beatrice, Brombacher, Frank, Cameron, Christopher J.F., Cannistraci, Carlo Vittorio, Cardenas, Ryan, Cardon, Melissa, Chang, Howard, Dostie, Josée, Favorov, Alexander, Fort, Alexandre, Garrido, Diego, Gil, Noa, Gimenez, Juliette, Guler, Reto, Harshbarger, Jayson, Hasegawa, Akira, Hasegawa, Yuki, Hashimoto, Kosuke, Hayatsu, Norihito, Heutink, Peter, Hirose, Tetsuro, Imada, Eddie L., Itoh, Masayoshi, Kaczkowski, Bogumil, Kanhere, Aditi, Kawabata, Emily, Kawashima, Tsugumi, Kelly, S. Thomas, Kojima, Miki, Koseki, Haruhiko, Kouno, Tsukasa, Kratz, Anton, Kurowska-Stolarska, Mariola, Kwon, Andrew Tae Jun, Leek, Jeffrey, Lennartsson, Andreas, Lizio, Marina, López-Redondo, Fernando, Luginbühl, Joachim, Makeev, Vsevolod J., Medvedeva, Yulia A., Minoda, Aki, Müller, Ferenc, Muñoz-Aguirre, Manuel, Murata, Mitsuyoshi, Nishiyori, Hiromi, Nitta, Kazuhiro R., Noguchi, Shuhei, Nurtdinov, Ramil, Okazaki, Yasushi, Orlando, Valerio, Paquette, Denis, Parr, Callum J.C., Rackham, Owen J.L., Rizzu, Patrizia, Martinez, Diego Fernando Sánchez, Sandelin, Albin, Sanjana, Pillay, Shibayama, Youtaro, Sivaraman, Divya M., Suzuki, Takahiro, Szumowski, Suzannah C., Tagami, Michihira, Taylor, Martin S., Terao, Chikashi, Thodberg, Malte, Thongjuea, Supat, Verardo, Roberto, Yamamoto, Chinatsu, Young, Robert S., Baillie, J. Kenneth, Forrest, Alistair R.R., Guigó, Roderic, Hoffman, Michael M., Hon, Chung Chau, Kasukawa, Takeya, Kere, Juha, Lenhard, Boris, Schneider, Claudio, Yagi, Ken, de Hoon, Michiel J.L., Shin, Jay W., Carninci, Piero
Published in Genome research