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Search Results - Pliatsika, Venetia
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Ribosomal RNA fragmentation into short RNAs (rRFs) is modulated in a sex- and population of origin-specific manner
by
Cherlin, Tess
,
Magee, Rogan
,
Jing, Yi
,
Pliatsika, Venetia
,
Loher, Phillipe
,
Rigoutsos, Isidore
Published in
BMC biology
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RNase κ promotes robust piRNA production by generating 2',3'-cyclic phosphate-containing precursors
by
Shigematsu, Megumi
,
Kawamura, Takuya
,
Morichika, Keisuke
,
Izumi, Natsuko
,
Kiuchi, Takashi
,
Honda, Shozo
,
Pliatsika, Venetia
,
Matsubara, Ryuma
,
Rigoutsos, Isidore
,
Katsuma, Susumu
,
Tomari, Yukihide
,
Kirino, Yohei
Published in
Nature communications
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The subcellular distribution of miRNA isoforms, tRNA-derived fragments, and rRNA-derived fragments depends on nucleotide sequence and cell type
by
Cherlin, Tess
,
Jing, Yi
,
Shah, Siddhartha
,
Kennedy, Anne
,
Telonis, Aristeidis G.
,
Pliatsika, Venetia
,
Wilson, Haley
,
Thompson, Lily
,
Vlantis, Panagiotis I.
,
Loher, Phillipe
,
Leiby, Benjamin
,
Rigoutsos, Isidore
Published in
BMC biology
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"Off-Spotter": very fast and exhaustive enumeration of genomic lookalikes for designing CRISPR/Cas guide RNAs
by
Pliatsika, Venetia
,
Rigoutsos, Isidore
Published in
Biology direct
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MINTbase v2.0: a comprehensive database for tRNA-derived fragments that includes nuclear and mitochondrial fragments from all The Cancer Genome Atlas projects
by
Pliatsika, Venetia
,
Loher, Phillipe
,
Magee, Rogan
,
Telonis, Aristeidis G
,
Londin, Eric
,
Shigematsu, Megumi
,
Kirino, Yohei
,
Rigoutsos, Isidore
Published in
Nucleic acids research
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tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities
by
Telonis, Aristeidis G
,
Loher, Phillipe
,
Magee, Rogan
,
Pliatsika, Venetia
,
Londin, Eric
,
Kirino, Yohei
,
Rigoutsos, Isidore
Published in
Cancer research (Chicago, Ill.)
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MINTbase: a framework for the interactive exploration of mitochondrial and nuclear tRNA fragments
by
Pliatsika, Venetia
,
Loher, Phillipe
,
Telonis, Aristeidis G
,
Rigoutsos, Isidore
Published in
Bioinformatics (Oxford, England)
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MINRbase: a comprehensive database of nuclear- and mitochondrial-ribosomal-RNA-derived fragments (rRFs)
by
Pliatsika, Venetia
,
Cherlin, Tess
,
Loher, Phillipe
,
Vlantis, Panagiotis
,
Nagarkar, Parth
,
Nersisyan, Stepan
,
Rigoutsos, Isidore
Published in
Nucleic acids research
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IsoMiRmap: fast, deterministic and exhaustive mining of isomiRs from short RNA-seq datasets
by
Loher, Phillipe
,
Karathanasis, Nestoras
,
Londin, Eric
,
F. Bray, Paul
,
Pliatsika, Venetia
,
Telonis, Aristeidis G.
,
Rigoutsos, Isidore
Published in
Bioinformatics (Oxford, England)
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Abstract B077: Ribosomal RNAs are fragmented into short RNAs in a manner that depends on a person’s sex, population origin, and race: implications for health disparities and person...
by
Cherlin, Tess
,
Magee, Rogan
,
Jing, Yi
,
Loher, Phillipe
,
Pliatsika, Venetia
,
Rigoutsos, Isidore
Published in
Cancer epidemiology, biomarkers & prevention
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