Susceptibility to coronary artery disease and diabetes is encoded by distinct, tightly linked SNPs in the ANRIL locus on chromosome 9p

by Broadbent, Helen M., Peden, John F., Lorkowski, Stefan, Goel, Anuj, Ongen, Halit, Green, Fiona, Clarke, Robert, Collins, Rory, Franzosi, Maria Grazia, Tognoni, Gianni, Seedorf, Udo, Rust, Stephan, Eriksson, Per, Hamsten, Anders, Farrall, Martin, Watkins, Hugh
Published in Human molecular genetics

Integrative genomic analysis of childhood acute lymphoblastic leukaemia lacking a genetic biomarker in the UKALL2003 clinical trial

by Schwab, Claire, Cranston, Ruth E, Ryan, Sarra L, Butler, Ellie, Winterman, Emily, Hawking, Zoe, Bashton, Matthew, Enshaei, Amir, Russell, Lisa J, Kingsbury, Zoya, Peden, John F, Barretta, Emilio, Murray, James, Gibson, Jude, Hinchliffe, Andrew C, Bain, Robert, Vora, Ajay, Bentley, David R, Ross, Mark T, Moorman, Anthony V, Harrison, Christine J
Published in Leukemia

Thirty-five common variants for coronary artery disease: the fruits of much collaborative labour

by PEDEN, John F, FARRALL, Martin
Published in Human molecular genetics

The somatic mutation profiles of 2,433 breast cancers refines their genomic and transcriptomic landscapes

by Pereira, Bernard, Chin, Suet-Feung, Rueda, Oscar M, Vollan, Hans-Kristian Moen, Provenzano, Elena, Bardwell, Helen A, Pugh, Michelle, Jones, Linda, Russell, Roslin, Sammut, Stephen-John, Tsui, Dana W Y, Liu, Bin, Dawson, Sarah-Jane, Abraham, Jean, Northen, Helen, Peden, John F, Mukherjee, Abhik, Turashvili, Gulisa, Green, Andrew R, McKinney, Steve, Oloumi, Arusha, Shah, Sohrab, Rosenfeld, Nitzan, Murphy, Leigh, Bentley, David R, Ellis, Ian O, Purushotham, Arnie, Pinder, Sarah E, Børresen-Dale, Anne-Lise, Earl, Helena M, Pharoah, Paul D, Ross, Mark T, Aparicio, Samuel, Caldas, Carlos
Published in Nature communications

Erratum: The somatic mutation profiles of 2,433 breast cancers refine their genomic and transcriptomic landscapes

by Pereira, Bernard, Chin, Suet-Feung, Rueda, Oscar M, Vollan, Hans-Kristian Moen, Provenzano, Elena, Bardwell, Helen A, Pugh, Michelle, Jones, Linda, Russell, Roslin, Sammut, Stephen-John, Tsui, Dana W Y, Liu, Bin, Dawson, Sarah-Jane, Abraham, Jean, Northen, Helen, Peden, John F, Mukherjee, Abhik, Turashvili, Gulisa, Green, Andrew R, McKinney, Steve, Oloumi, Arusha, Shah, Sohrab, Rosenfeld, Nitzan, Murphy, Leigh, Bentley, David R, Ellis, Ian O, Purushotham, Arnie, Pinder, Sarah E, Børresen-Dale, Anne-Lise, Earl, Helena M, Pharoah, Paul D, Ross, Mark T, Aparicio, Samuel, Caldas, Carlos
Published in Nature communications

Genetic Loci Associated With C-Reactive Protein Levels and Risk of Coronary Heart Disease

by Elliott, Paul, Chambers, John C, Zhang, Weihua, Clarke, Robert, Hopewell, Jemma C, Peden, John F, Erdmann, Jeanette, Braund, Peter, Engert, James C, Bennett, Derrick, Coin, Lachlan, Ashby, Deborah, Tzoulaki, Ioanna, Brown, Ian J, Mt-Isa, Shahrul, McCarthy, Mark I, Peltonen, Leena, Freimer, Nelson B, Farrall, Martin, Ruokonen, Aimo, Hamsten, Anders, Lim, Noha, Froguel, Philippe, Waterworth, Dawn M, Vollenweider, Peter, Waeber, Gerard, Jarvelin, Marjo-Riitta, Mooser, Vincent, Scott, James, Hall, Alistair S, Schunkert, Heribert, Anand, Sonia S, Collins, Rory, Samani, Nilesh J, Watkins, Hugh, Kooner, Jaspal S
Published in JAMA : the journal of the American Medical Association

HLA Has Strongest Association with IgA Nephropathy in Genome-Wide Analysis

by FEEHALLY, John, FARRALL, Martin, PADMANABHAN, Sandosh, VYSE, Timothy J, ZAWADZKA, Anna, REES, Andrew J, LATHROP, Mark, RATCLIFFET, Peter J, BOLAND, Anne, GALE, Daniel P, GUT, Ivo, HEATH, Simon, KUMAR, Ashish, PEDEN, John F, MAXWELL, Patrick H, MORRIS, David L
Published in Journal of the American Society of Nephrology

Variation in the strength of selected codon usage bias among bacteria

by Sharp, Paul M., Bailes, Elizabeth, Grocock, Russell J., Peden, John F., Sockett, R. Elizabeth
Published in Nucleic acids research

Inter-species horizontal transfer resulting in core-genome and niche-adaptive variation within Helicobacter pylori

by Saunders, Nigel J, Boonmee, Prawit, Peden, John F, Jarvis, Stephen A
Published in BMC genomics

Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58

by Tettelin, Hervé, Saunders, Nigel J., Heidelberg, John, Jeffries, Alex C., Nelson, Karen E., Eisen, Jonathan A., Ketchum, Karen A., Hood, Derek W., Peden, John F., Dodson, Robert J., Nelson, William C., Gwinn, Michelle L., DeBoy, Robert, Peterson, Jeremy D., Hickey, Erin K., Haft, Daniel H., Salzberg, Steven L., White, Owen, Fleischmann, Robert D., Dougherty, Brian A., Mason, Tanya, Ciecko, Anne, Parksey, Debbie S., Blair, Eric, Cittone, Henry, Clark, Emily B., Cotton, Matthew D., Utterback, Terry R., Khouri, Hoda, Qin, Haiying, Vamathevan, Jessica, Gill, John, Scarlato, Vincenzo, Masignani, Vega, Pizza, Mariagrazia, Grandi, Guido, Sun, Li, Smith, Hamilton O., Fraser, Claire M., Moxon, E. Richard, Rappuoli, Rino, Venter, J. Craig
Published in Science (American Association for the Advancement of Science)

Genome-wide mapping of susceptibility to coronary artery disease identifies a novel replicated locus on chromosome 17

by Farrall, Martin, Green, Fiona R, Peden, John F, Olsson, Per G, Clarke, Robert, Hellenius, Mai-Lis, Rust, Stephan, Lagercrantz, Jacob, Franzosi, Maria Grazia, Schulte, Helmut, Carey, Alisoun, Olsson, Gunnar, Assmann, Gerd, Tognoni, Gianni, Collins, Rory, Hamsten, Anders, Watkins, Hugh
Published in PLoS genetics

The somatic mutation profiles of 2,433 breast cancers refine their genomic and transcriptomic landscapes

by Pereira, Bernard, Chin, Suet-Feung, Rueda, Oscar M., Vollan, Hans-Kristian Moen, Provenzano, Elena, Bardwell, Helen A., Pugh, Michelle, Jones, Linda, Russell, Roslin, Sammut, Stephen-John, Tsui, Dana W. Y., Liu, Bin, Dawson, Sarah-Jane, Abraham, Jean, Northen, Helen, Peden, John F., Mukherjee, Abhik, Turashvili, Gulisa, Green, Andrew R., McKinney, Steve, Oloumi, Arusha, Shah, Sohrab, Rosenfeld, Nitzan, Murphy, Leigh, Bentley, David R., Ellis, Ian O., Purushotham, Arnie, Pinder, Sarah E., Børresen-Dale, Anne-Lise, Earl, Helena M., Pharoah, Paul D., Ross, Mark T., Aparicio, Samuel, Caldas, Carlos
Published in Nature communications

DNA Sequence Evolution: The Sounds of Silence

by Sharp, Paul M., Averof, Michalis, Lloyd, Andrew T., Matassi, Giorgio, Peden, John F.
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences

Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16

by DANIELS, Rachael J, PEDEN, John F, HIGGS, Douglas R, LLOYD, Christine, HORSLEY, Sharon W, CLARK, Kevin, TUFARELLI, Cristina, KEARNEY, Lyndal, BUCKLE, Veronica J, DOGGETT, Norman A, FLINT, Jonathan
Published in Human molecular genetics

Novel Associations of Multiple Genetic Loci With Plasma Levels of Factor VII, Factor VIII, and von Willebrand Factor The CHARGE (Cohorts for Heart and Aging Research in Genome Epid...

by SMITH, Nicholas L, CHEN, Ming-Huei, DE MAAT, Moniek P. M, RUMLEY, Ann, XIAOXIAO KONG, QIONG YANG, WILLIAMS, Frances M. K, VITART, Veronique, CAMPBELL, Harry, MÄLARSTIG, Anders, WIGGINS, Kerri L, VAN DUIJN, Cornelia M, DEHGHAN, Abbas, MCARDLE, Wendy L, PANKOW, James S, JOHNSON, Andrew D, SILVEIRA, Angela, MCKNIGHT, Barbara, UITTERLINDEN, Andre G, ALEKSIC, Nena, MEIGS, James B, PETERS, Annette, KOENIG, Wolfgang, STRACHAN, David P, CUSHMAN, Mary, KATHIRESAN, Sekar, ROTTER, Jerome I, BOVILL, Edwin G, HOFMAN, Albert, BOERWINKLE, Eric, TOFLER, Geoffrey H, PEDEN, John F, PSATY, Bruce M, LEEBEEK, Frank, BASU, Saonli, FOLSOM, Aaron R, LARSON, Martin G, SPECTOR, Timothy D, WRIGHT, Alan F, WILSON, James F, HAMSTEN, Anders, LUMLEY, Thomas, WITTEMAN, Jacqueline C. M, WEIHONG TANG, O'DONNELL, Christopher J, SORANZO, Nicole, HAYWARD, Caroline, RUDAN, Igor, SABATER-LLEAL, Maria, BIS, Joshua C
Published in Circulation (New York, N.Y.)

Effects of Long-Term Averaging of Quantitative Blood Pressure Traits on the Detection of Genetic Associations

by Guo, Xiuqing, Bis, Joshua C., Yang, Min-Lee, Ehret, Georg, Sijbrands, Eric J., Eiriksdottir, Gudny, Pihur, Vasyl, Vasan, Ramachandran S., Gateva, Vesela, Tobin, Martin D., Bochud, Murielle, Zhao, Jing Hua, Heath, Simon C., Eyheramendy, Susana, Zhang, Feng, Farrall, Martin, Wallace, Chris, Khaw, Kay-Tee, Nilsson, Peter, Polidoro, Silvia, Grobbee, Diederick E., Onland-Moret, N. Charlotte, Teumer, Alexander, Luan, Jian’an, Burton, Paul R., McArdle, Wendy L., Brown, Morris, Newhouse, Stephen J., Webster, John, Zeggini, Eleftheria, Bergmann, Sven, Song, Kijoung, Waeber, Gerard, Yuan, Xin, Groop, Leif, Di Gregorio, Alessandra, Guarrera, Simonetta, Panico, Salvatore, Romanazzi, Valeria, Vineis, Paolo, Luben, Robert N., Crawford, Gabriel J., Boehnke, Michael, Collins, Francis S., Jackson, Anne U., Stringham, Heather M., Morken, Mario A., Gieger, Christian, Wichmann, H. Erich, O’Donnell, Christopher J., Siscovick, David S., O’Reilly, Paul F., Peltonen, Leena, Pouta, Anneli, van Gilst, Wiek H., Clarke, Robert, Goel, Anuj, Syvänen, Ann-Christine, Scheet, Paul, Scuteri, Angelo, Ernst, Florian, Felix, Stephan B., Lorbeer, Roberto, Völker, Uwe, Hercberg, Serge, Zeleneka, Diana, Deloukas, Panos, Soranzo, Nicole, Zhai, Guangju, Laakso, Markku, Forouhi, Nita G., Völzke, Henry, Numans, Mattijs E., Navis, Gerjan, Paterson, Andrew D., Bandinelli, Stefania, Spector, Tim D., Altshuler, David, Strachan, David P., Jarvelin, Marjo-Riitta, Melander, Olle, Loos, Ruth J.F., Caulfield, Mark, Raffel, Leslie J., Amin, Najaf, Rotter, Jerome I., Launer, Lenore J., Caulfield, Mark, Morrison, Alanna C., Li, Guo, Harris, Tamara B., Zhang, He, Siscovick, David S., Gao, Wei, Rivadeneira, Fernando, Willer, Cristen J., Huo, Yong, Palmas, Walter, van Duijn, Cornelia, Fornage, Myriam
Published in American journal of human genetics

Four novel Loci (19q13, 6q24, 12q24, and 5q14) influence the microcirculation in vivo

by Ikram, M Kamran, Sim, Xueling, Xueling, Sim, Jensen, Richard A, Cotch, Mary Frances, Hewitt, Alex W, Ikram, M Arfan, Wang, Jie Jin, Klein, Ronald, Klein, Barbara E K, Breteler, Monique M B, Cheung, Ning, Liew, Gerald, Mitchell, Paul, Uitterlinden, Andre G, Rivadeneira, Fernando, Hofman, Albert, de Jong, Paulus T V M, van Duijn, Cornelia M, Kao, Linda, Cheng, Ching-Yu, Smith, Albert Vernon, Glazer, Nicole L, Lumley, Thomas, McKnight, Barbara, Psaty, Bruce M, Jonasson, Fridbert, Eiriksdottir, Gudny, Aspelund, Thor, Harris, Tamara B, Launer, Lenore J, Taylor, Kent D, Li, Xiaohui, Iyengar, Sudha K, Xi, Quansheng, Sivakumaran, Theru A, Mackey, David A, Macgregor, Stuart, Martin, Nicholas G, Young, Terri L, Bis, Josh C, Wiggins, Kerri L, Heckbert, Susan R, Hammond, Christopher J, Andrew, Toby, Fahy, Samantha, Attia, John, Holliday, Elizabeth G, Scott, Rodney J, Islam, F M Amirul, Rotter, Jerome I, McAuley, Annie K, Boerwinkle, Eric, Tai, E Shyong, Gudnason, Vilmundur, Siscovick, David S, Vingerling, Johannes R, Wong, Tien Y
Published in PLoS genetics

Absence in Helicobacter pylori of an uptake sequence for enhancing uptake of homospecific DNA during transformation

by Saunders, Nigel J, Peden, John F, Moxon, E. Richard
Published in Microbiology (Society for General Microbiology)

SNP cherry picker: maximizing the chance of finding an association with a disease SNP

by Harris, Mark, Martin, Jeremy M. R., Peden, John F., Rawlings, Christopher J.
Published in Bioinformatics

Common Variants in the ATP2B1 Gene Are Associated With Susceptibility to Hypertension: The Japanese Millennium Genome Project

by Tabara, Yasuharu, Kohara, Katsuhiko, Kita, Yoshikuni, Hirawa, Nobuhito, Katsuya, Tomohiro, Ohkubo, Takayoshi, Hiura, Yumiko, Tajima, Atsushi, Morisaki, Takayuki, Miyata, Toshiyuki, Nakayama, Tomohiro, Takashima, Naoyuki, Nakura, Jun, Kawamoto, Ryuichi, Takahashi, Norio, Hata, Akira, Soma, Masayoshi, Imai, Yutaka, Kokubo, Yoshihiro, Okamura, Tomonori, Tomoike, Hitonobu, Iwai, Naoharu, Ogihara, Toshio, Inoue, Itsuro, Tokunaga, Katsushi, Johnson, Toby, Caulfield, Mark, Munroe, Patricia, Umemura, Satoshi, Ueshima, Hirotsugu, Miki, Tetsuro
Published in Hypertension (Dallas, Tex. 1979)