Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure

by Flis, Anna, Fernández, Aurora Piñas, Zielinski, Tomasz, Mengin, Virginie, Sulpice, Ronan, Stratford, Kevin, Hume, Alastair, Pokhilko, Alexandra, Southern, Megan M., Seaton, Daniel D., McWatters, Harriet G., Stitt, Mark, Halliday, Karen J., Millar, Andrew J.
Published in Open biology

Integration of Circadian and Phototransduction Pathways in the Network Controlling CAB Gene Transcription in Arabidopsis

by Millar, Andrew J., Kay, Steve A.
Published in Proceedings of the National Academy of Sciences - PNAS

Peroxiredoxins are conserved markers of circadian rhythms

by EDGAR, Rachel S, GREEN, Edward W, MAYWOOD, Elizabeth S, HASTINGS, Michael H, BALIGA, Nitin S, MERROW, Martha, MILLAR, Andrew J, JOHNSON, Carl H, KYRIACOU, Charalambos P, O'NEILL, John S, REDDY, Akhilesh B, YUWEI ZHAO, OOIJEN, Gerben Van, OLMEDO, Maria, XIMING QIN, YAO XU, MIN PAN, VALEKUNJA, Utham K, FEENEY, Kevin A
Published in Nature (London)

Clocks in Algae

by Noordally, Zeenat B, Millar, Andrew J
Published in Biochemistry (Easton)

Robustness from flexibility in the fungal circadian clock

by Akman, Ozgur E, Rand, David A, Brown, Paul E, Millar, Andrew J
Published in BMC systems biology

circadian clock. A plant's best friend in a spinning world

by Eriksson, M.E, Millar, A.J
Published in Plant physiology (Bethesda)

Consistent robustness analysis (CRA) identifies biologically relevant properties of regulatory network models

by Saithong, Treenut, Painter, Kevin J, Millar, Andrew J
Published in PloS one

The Circadian Clock Gene Circuit Controls Protein and Phosphoprotein Rhythms in Arabidopsis thaliana

by Krahmer, Johanna, Hindle, Matthew, Perby, Laura K., Mogensen, Helle K., Nielsen, Tom H., Halliday, Karen J., van Ooijen, Gerben, Le Bihan, Thierry, Millar, Andrew J.
Published in Molecular & cellular proteomics

A phospho-dawn of protein modification anticipates light onset in the picoeukaryote Ostreococcus tauri

by Noordally, Zeenat B, Hindle, Matthew M, Martin, Sarah F, Seaton, Daniel D, Simpson, T Ian, Le Bihan, Thierry, Millar, Andrew J
Published in Journal of experimental botany

Practical steps to digital organism models, from laboratory model species to ‘Crops in silico

by Millar, Andrew J, Urquiza, Uriel, Freeman, Peter L, Hume, Alastair, Plotkin, Gordon D, Sorokina, Oxana, Zardilis, Argyris, Zielinski, Tomasz
Published in Journal of experimental botany

A Bayesian approach for structure learning in oscillating regulatory networks

by Trejo Banos, Daniel, Millar, Andrew J, Sanguinetti, Guido
Published in Bioinformatics (Oxford, England)

Forward Genetic Analysis of the Circadian Clock Separates the Multiple Functions of ZEITLUPE

by Kevei, Éva, Gyula, Péter, Hall, Anthony, Kozma-Bognár, László, Kim, Woe-Yeon, Eriksson, Maria E, Tóth, Réka, Hanano, Shigeru, Fehér, Balázs, Southern, Megan M, Bastow, Ruth M, Viczián, András, Hibberd, Victoria, Davis, Seth J, Somers, David E, Nagy, Ferenc, Millar, Andrew J
Published in Plant physiology (Bethesda)

Digital clocks: simple Boolean models can quantitatively describe circadian systems

by Akman, Ozgur E., Watterson, Steven, Parton, Andrew, Binns, Nigel, Millar, Andrew J., Ghazal, Peter
Published in Journal of the Royal Society interface

Input signals to the plant circadian clock

by Millar, A.J
Published in Journal of experimental botany

A Reduced-Function Allele Reveals That EARLY FLOWERING3 Repressive Action on the Circadian Clock Is Modulated by Phytochrome Signals in Arabidopsis

by Kolmos, Elsebeth, Herrero, Eva, Bujdoso, Nora, Millar, Andrew J., Tóth, Réka, Gyula, Peter, Nagy, Ferenc, Davis, Seth J.
Published in The Plant cell

HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 Is Required for Circadian Periodicity through the Promotion of Nucleo-Cytoplasmic mRNA Export in Arabidopsis

by MacGregor, Dana R., Gould, Peter, Foreman, Julia, Griffiths, Jayne, Bird, Susannah, Page, Rhiannon, Stewart, Kelly, Steel, Gavin, Young, Jack, Paszkiewicz, Konrad, Millar, Andrew J., Halliday, Karen J., Hall, Anthony J., Penfield, Steven
Published in The Plant cell

Model selection reveals control of cold signalling by evening‐phased components of the plant circadian clock

by Keily, Jack, MacGregor, Dana R., Smith, Robert W., Millar, Andrew J., Halliday, Karen J., Penfield, Steven
Published in The Plant journal : for cell and molecular biology

FLOWERING LOCUS C-dependent and -independent regulation of the circadian clock by the autonomous and vernalization pathways

by Salathia, Neeraj, Davis, Seth J, Lynn, James R, Michaels, Scott D, Amasino, Richard M, Millar, Andrew J
Published in BMC plant biology

Distinct regulation of CAB and PHYB gene expression by similar circadian clocks

by Hall, Anthony, Kozma‐Bognár, László, Bastow, Ruth M., Nagy, Ferenc, Millar, Andrew J.
Published in The Plant journal : for cell and molecular biology

Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis

by Ashelford, Kevin, Eriksson, Maria E, Allen, Christopher M, D'Amore, Rosalinda, Johansson, Mikael, Gould, Peter, Kay, Suzanne, Millar, Andrew J, Hall, Neil, Hall, Anthony
Published in Genome biology