Comparative sequencing provides insights about the structure and conservation of marsupial and monotreme genomes by Margulies, Elliott H, Maduro, Valerie V B, Thomas, Pamela J, Tomkins, Jeffery P, Amemiya, Chris T, Luo, Meizhong, Green, Eric D

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Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome by Margulies, Elliott H, Cooper, Gregory M, Asimenos, George, Thomas, Daryl J, Dewey, Colin N, Siepel, Adam, Birney, Ewan, Keefe, Damian, Schwartz, Ariel S, Hou, Minmei, Taylor, James, Nikolaev, Sergey, Montoya-Burgos, Juan I, Löytynoja, Ari, Whelan, Simon, Pardi, Fabio, Massingham, Tim, Brown, James B, Bickel, Peter, Holmes, Ian, Mullikin, James C, Ureta-Vidal, Abel, Paten, Benedict, Stone, Eric A, Rosenbloom, Kate R, Kent, W James, Bouffard, Gerard G, Guan, Xiaobin, Hansen, Nancy F, Idol, Jacquelyn R, Maduro, Valerie V B, Maskeri, Baishali, McDowell, Jennifer C, Park, Morgan, Thomas, Pamela J, Young, Alice C, Blakesley, Robert W, Muzny, Donna M, Sodergren, Erica, Wheeler, David A, Worley, Kim C, Jiang, Huaiyang, Weinstock, George M, Gibbs, Richard A, Graves, Tina, Fulton, Robert, Mardis, Elaine R, Wilson, Richard K, Clamp, Michele, Cuff, James, Gnerre, Sante, Jaffe, David B, Chang, Jean L, Lindblad-Toh, Kerstin, Lander, Eric S, Hinrichs, Angie, Trumbower, Heather, Clawson, Hiram, Zweig, Ann, Kuhn, Robert M, Barber, Galt, Harte, Rachel, Karolchik, Donna, Field, Matthew A, Moore, Richard A, Matthewson, Carrie A, Schein, Jacqueline E, Marra, Marco A, Antonarakis, Stylianos E, Batzoglou, Serafim, Goldman, Nick, Hardison, Ross, Haussler, David, Miller, Webb, Pachter, Lior, Green, Eric D, Sidow, Arend

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project by Margulies, Elliott H, Snyder, Michael, Thurman, Robert E, Neph, Shane, Malhotra, Ankit, Andrews, Robert M, Flicek, Paul, Carter, Nigel P, Day, Nathan, Dillon, Shane C, Dorschner, Michael O, Frum, Tristan T, Parker, Stephen C J, Sandstrom, Richard, Vetrie, David, Yu, Man, Dekker, Job, Reymond, Alexandre, Kapranov, Philipp, Castelo, Robert, Frankish, Adam, Ghosh, Srinka, Hofacker, Ivo L, Baertsch, Robert, Dike, Sujit, Cheng, Jill, Lagarde, Julien, Hertel, Jana, Tanzer, Andrea, Emanuelsson, Olof, Pedersen, Jakob S, Taylor, Ruth, Swarbreck, David, Thomas, Daryl J, Srinivasan, K G, Ooi, Hong Sain, Pachter, Lior, Ucla, Catherine, Brown, James B, Tammana, Hari, Chrast, Jacqueline, Henrichsen, Charlotte N, Kai, Chikatoshi, Lian, Zheng, Newburger, Peter, Hayashizaki, Yoshihide, Rogers, Jane, Ruan, Yijun, Struhl, Kevin, Antonarakis, Stylianos E, Taylor, James, Liefer, Laura A, Cooper, Gregory M, Whelan, Simon, Huang, Haiyan, Mullikin, James C, Seringhaus, Michael, Kent, W James, Hardison, Ross C, Miller, Webb, Trinklein, Nathan D, Barrera, Leah, Bieda, Mark C, Vega, Vinsensius B, Ng, Patrick, Yang, Annie, Squazzo, Sharon, Richmond, Todd A, Rada-Iglesias, Alvaro, Fowler, Joanna C, Van Calcar, Sara, Heintzman, Nate, Hon, Gary, Rosenfeld, M Geoff, Cooper, Sara J, Xu, Mousheng, Iyer, Vishwanath R, Green, Roland D, Wadelius, Claes, Farnham, Peggy J, Ren, Bing, Hillman-Jackson, Jennifer, Barber, Galt, Karolchik, Donna, Martin, Joel D, Stranger, Barbara E, Davydov, Eugene, Zody, Michael C, Estivill, Xavier, Hansen, Nancy F, Maskeri, Baishali, Thomas, Pamela J, Sodergren, Erica, Weinstock, George M, Gibbs, Richard A, Graves, Tina, Fulton, Robert, Mardis, Elaine R, Cuff, James, Yoshinaga, Yuko

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Parallel construction of orthologous sequence-ready clone contig maps in multiple species by Thomas, James W, Prasad, Arjun B, Summers, Tyrone J, Lee-Lin, Shih-Queen, Maduro, Valerie V B, Idol, Jacquelyn R, Ryan, Joseph F, Thomas, Pamela J, McDowell, Jennifer C, Green, Eric D

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Pericentromeric duplications in the laboratory mouse by Thomas, James W, Schueler, Mary G, Summers, Tyrone J, Blakesley, Robert W, McDowell, Jennifer C, Thomas, Pamela J, Idol, Jacquelyn R, Maduro, Valerie V B, Lee-Lin, Shih-Queen, Touchman, Jeffrey W, Bouffard, Gerard G, Beckstrom-Sternberg, Stephen M, Green, Eric D

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Comparative Sequencing Provides Insights about the Structure and Consevation of Marsupial and Monotreme Genomes by Margulies, Elliott H., NISC Comparative Sequencing Program, Valerie V. B. Maduro, Thomas, Pamela J., Tomkins, Jeffery P., Amemiya, Chris T., Luo, Meizhong, Green, Eric D., Collins, Francis S.

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MARRVEL: Integration of Human and Model Organism Genetic Resources to Facilitate Functional Annotation of the Human Genome by Wan, Ying-Wooi, Wangler, Michael F., Yamamoto, Shinya, Chao, Hsiao-Tuan, Mohr, Stephanie E., Adams, Christopher J., Allard, Patrick, Azamian, Mashid S., Bacino, Carlos A., Balasubramanyam, Ashok, Barseghyan, Hayk, Beggs, Alan H., Bellen, Hugo J., Bernstein, Jonathan A., Birch, Camille L., Briere, Lauren C., Burke, Elizabeth A., Burrage, Lindsay C., Chao, Katherine R., Clark, Gary D., Cogan, Joy D., Cooper, Cynthia M., Craigen, William J., Dell’Angelica, Esteban C., Donnell-Fink, Laurel A., Draper, David D., Dries, Annika M., Emrick, Lisa T., Goheen, Mitchell, Golas, Gretchen A., Goldstein, David B., Gordon, Mary G., Gourdine, Jean-Philippe F., Graham, Brett H., Groden, Catherine A., Hackbarth, Mary E., Hamid, Rizwan, Hardee, Isabel, Holm, Ingrid A., Howerton, Ellen M., Jacob, Howard J., Johnston, Jean M., Koeller, David M., Kohler, Jennefer N., Krier, Joel B., Kyle, Jennifer E., Lalani, Seema R., Latham, Lea, Latour, Yvonne L., Lee, Paul R., Levy, Shawn E., Liebendorfer, Adam P., Loomis, Carson R., Maas, Richard L., MacRae, Calum A., Manolio, Teri A., McConkie-Rosell, Allyn, McCray, Alexa T., Moretti, Paolo M., Mulvihill, John J., Murphy, Jennifer L., Muzny, Donna M., Nehrebecky, Michele E., Newberry, J. Scott, Nicholas, Sarah K., Novacic, Donna, Orange, Jordan S., Pena, Loren D.M., Posey, Jennifer E., Potocki, Lorraine, Ramoni, Rachel B., Robertson, Amy K., Rodan, Lance H., Schoch, Kelly, Scott, Daryl A., Sharma, Prashant, Silverman, Edwin K., Soldatos, Ariane G., Splinter, Kimberly, Stoler, Joan M., Strong, Kimberly A., Sullivan, Jennifer A., Sweetser, David A., Thomas, Sara P., Tifft, Cynthia J., Tolman, Nathanial J., Toro, Camilo, Tran, Alyssa A., Vilain, Eric, Wahl, Colleen E., Walley, Nicole M., Webb-Robertson, Bobbie-Jo M., Weech, Alec A., Westerfield, Monte, Wolfe, Lynne A., Yamamoto, Shinya, Yang, Yaping, Zornio, Patricia A., Perrimon, Norbert, Bellen, Hugo J.

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The Undiagnosed Diseases Network: Accelerating Discovery about Health and Disease by Ramoni, Rachel B., Mulvihill, John J., Adams, David R., Allard, Patrick, Ashley, Euan A., Gahl, William A., Loscalzo, Joseph, Adams, Christopher J., Alejandro, Mercedes E., Allard, Patrick, Ashley, Euan A., Azamian, Mashid S., Balasubramanyam, Ashok, Beggs, Alan H., Bellen, Hugo J., Bernstein, Jonathan A., Bick, David P., Birch, Camille L., Boone, Braden E., Briere, Lauren C., Brush, Matthew, Cogan, Joy D., Craigen, William J., Davids, Mariska, Dayal, Jyoti G., Dhar, Shweta U., Dipple, Katrina M., Dorrani, Naghmeh, Dorset, Daniel C., Eckstein, David J., Estwick, Tyra, Godfrey, Rena A., Goheen, Mitchell, Goldstein, David B., Gordon, Mary “Gracie” G., Gourdine, Jean-Philippe F., Haendel, Melissa, Hamid, Rizwan, Handley, Lori H., Hardee, Isabel, Holm, Ingrid A., Howerton, Ellen M., Jacob, Howard J., Jones, Angela L., Koehler, Alanna E., Kohler, Jennefer N., Krasnewich, Donna M., Kyle, Jennifer E., Latham, Lea, Lau, C. Christopher, Lazar, Jozef, Lee, Hane, Lee, Paul R., Levy, Shawn E., Levy, Denise J., Lewis, Richard A., Liebendorder, Adam P., Loomis, Carson R., Loscalzo, Joseph, Maas, Richard L., MacRae, Calum A., Manolio, Teri A., Markello, Thomas C., Mazur, Paul, McConkie-Rosell, Allyn, Metz, Thomas O., Might, Matthew, Moretti, Paolo M., Murphy, Jennifer L., Muzny, Donna M., Nehrebecky, Michele E., Nelson, Stan F., Newman, John H., Nicholas, Sarah K., Palmer, Christina G.S., Phillips, John A., Postlethwait, John H., Rosenfeld, Jill A., Schaffer, Katherine E., Schroeder, Molly C., Scott, Daryl A., Shashi, Vandana, Silverman, Edwin K., Sinsheimer, Janet S., Spillmann, Rebecca C., Stoler, Joan M., Stong, Nicholas, Sullivan, Jennifer A., Tolman, Nathanial J., Tran, Alyssa A., Valivullah, Zaheer M., Waggott, Daryl M., Walsh, Chris A., Wangler, Michael F., Warburton, Mike, Ward, Patricia A., Waters, Katrina M., Wheeler, Matthew T., Yu, Guoyun, Wise, Anastasia L.

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Model Organisms Facilitate Rare Disease Diagnosis and Therapeutic Research by Wangler, Michael F, Yamamoto, Shinya, Chao, Hsiao-Tuan, Posey, Jennifer E, Westerfield, Monte, Postlethwait, John, Hieter, Philip, Boycott, Kym M, Campeau, Philippe M, Bellen, Hugo J

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