Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia by Kilpatrick, Alastair M, Rahman, Farzana, Anjum, Audra, Shome, Sayane, Andalib, K M Salim, Banik, Shrabonti, Chowdhury, Sanjana F, Coombe, Peter, Astroz, Yesid Cuesta, Douglas, J Maxwell, Eranti, Pradeep, Kiran, Aleyna D, Kumar, Sachendra, Lim, Hyeri, Lorenzi, Valentina, Lubiana, Tiago, Mahmud, Sakib, Puche, Rafael, Rybarczyk, Agnieszka, Al Sium, Syed Muktadir, Twesigomwe, David, Zok, Tomasz, Orengo, Christine A, Friedberg, Iddo, Kelso, Janet F, Welch, Lonnie

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Integration of text- and data-mining using ontologies successfully selects disease gene candidates by Tiffin, Nicki, Kelso, Janet F., Powell, Alan R., Pan, Hong, Bajic, Vladimir B., Hide, Winston A.

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The contribution of exon-skipping events on chromosome 22 to protein coding diversity by Hide, W A, Babenko, V N, van Heusden, P A, Seoighe, C, Kelso, J F

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Fast and sensitive taxonomic assignment to metagenomic contigs by Mirdita, M, Steinegger, M, Breitwieser, F, Söding, J, Levy Karin, E

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Phyx: phylogenetic tools for unix by Brown, Joseph W, Walker, Joseph F, Smith, Stephen A

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MASCOT: parameter and state inference under the marginal structured coalescent approximation by Müller, Nicola F, Rasmussen, David, Stadler, Tanja

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On the representativeness and stability of a set of EFMs by Guil, Francisco, Hidalgo, José F, García, José M

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Microbench: automated metadata management for systems biology benchmarking and reproducibility in Python by Lubbock, Alexander L R, Lopez, Carlos F

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Phenopolis: an open platform for harmonization and analysis of genetic and phenotypic data by Pontikos, Nikolas, Yu, Jing, Moghul, Ismail, Withington, Lucy, Blanco-Kelly, Fiona, Vulliamy, Tom, Wong, Tsz Lun Ernest, Murphy, Cian, Cipriani, Valentina, Fiorentino, Alessia, Arno, Gavin, Greene, Daniel, Jacobsen, Julius O B, Clark, Tristan, Gregory, David S, Nemeth, Andrea M, Halford, Stephanie, Inglehearn, Chris F, Downes, Susan, Black, Graeme C, Webster, Andrew R, Hardcastle, Alison J, Plagnol, Vincent

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PlanNET: homology-based predicted interactome for multiple planarian transcriptomes by Castillo-Lara, S, Abril, J F

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Isoform-level gene expression patterns in single-cell RNA-sequencing data by Vu, Trung Nghia, Wills, Quin F, Kalari, Krishna R, Niu, Nifang, Wang, Liewei, Pawitan, Yudi, Rantalainen, Mattias

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DECO: decompose heterogeneous population cohorts for patient stratification and discovery of sample biomarkers using omic data profiling by Campos-Laborie, F J, Risueño, A, Ortiz-Estévez, M, Rosón-Burgo, B, Droste, C, Fontanillo, C, Loos, R, Sánchez-Santos, J M, Trotter, M W, De Las Rivas, J

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ViCTree: an automated framework for taxonomic classification from protein sequences by Modha, Sejal, Thanki, Anil S, Cotmore, Susan F, Davison, Andrew J, Hughes, Joseph

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bcGST—an interactive bias-correction method to identify over-represented gene-sets in boutique arrays by Wang, Kevin Y X, Menzies, Alexander M, Silva, Ines P, Wilmott, James S, Yan, Yibing, Wongchenko, Matthew, Kefford, Richard F, Scolyer, Richard A, Long, Georgina V, Tarr, Garth, Mueller, Samuel, Yang, Jean Y H

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The Simons Genome Diversity Project: 300 genomes from 142 diverse populations by Mallick, Swapan, Li, Heng, Lipson, Mark, Mathieson, Iain, Gymrek, Melissa, Racimo, Fernando, Zhao, Mengyao, Chennagiri, Niru, Nordenfelt, Susanne, Tandon, Arti, Skoglund, Pontus, Lazaridis, Iosif, Sankararaman, Sriram, Fu, Qiaomei, Rohland, Nadin, Renaud, Gabriel, Erlich, Yaniv, Willems, Thomas, Gallo, Carla, Spence, Jeffrey P, Song, Yun S, Poletti, Giovanni, Balloux, Francois, van Driem, George, de Knijff, Peter, Romero, Irene Gallego, Jha, Aashish R, Behar, Doron M, Bravi, Claudio M, Capelli, Cristian, Hervig, Tor, Moreno-Estrada, Andres, Posukh, Olga L, Balanovska, Elena, Balanovsky, Oleg, Karachanak-Yankova, Sena, Sahakyan, Hovhannes, Toncheva, Draga, Yepiskoposyan, Levon, Tyler-Smith, Chris, Xue, Yali, Abdullah, M Syafiq, Ruiz-Linares, Andres, Beall, Cynthia M, Di Rienzo, Anna, Jeong, Choongwon, Starikovskaya, Elena B, Metspalu, Ene, Parik, Jüri, Villems, Richard, Henn, Brenna M, Hodoglugil, Ugur, Mahley, Robert, Sajantila, Antti, Stamatoyannopoulos, George, Wee, Joseph T S, Khusainova, Rita, Khusnutdinova, Elza, Litvinov, Sergey, Ayodo, George, Comas, David, Hammer, Michael F, Kivisild, Toomas, Klitz, William, Winkler, Cheryl A, Labuda, Damian, Bamshad, Michael, Jorde, Lynn B, Tishkoff, Sarah A, Watkins, W Scott, Metspalu, Mait, Dryomov, Stanislav, Sukernik, Rem, Singh, Lalji, Thangaraj, Kumarasamy, Pääbo, Svante, Kelso, Janet, Patterson, Nick, Reich, David

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A High-Coverage Genome Sequence from an Archaic Denisovan Individual by Meyer, Matthias, Kircher, Martin, Gansauge, Marie-Theres, Li, Heng, Racimo, Fernando, Mallick, Swapan, Schraiber, Joshua G., Jay, Flora, Prüfer, Kay, de Filippo, Cesare, Sudmant, Peter H., Alkan, Can, Fu, Qiaomei, Do, Ron, Rohland, Nadin, Tandon, Arti, Siebauer, Michael, Green, Richard E., Bryc, Katarzyna, Briggs, Adrian W., Stenzel, Udo, Dabney, Jesse, Shendure, Jay, Kitzman, Jacob, Hammer, Michael F., Shunkov, Michael V., Derevianko, Anatoli P., Patterson, Nick, Andrés, Aida M., Eichler, Evan E., Slatkin, Montgomery, Reich, David, Kelso, Janet, Pääbo, Svante

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Genetic history of an archaic hominin group from Denisova Cave in Siberia by Reich, David, Viola, Bence, Pääbo, Svante, Green, Richard E, Kircher, Martin, Krause, Johannes, Patterson, Nick, Durand, Eric Y, Briggs, Adrian W, Stenzel, Udo, Johnson, Philip L. F, Maricic, Tomislav, Good, Jeffrey M, Marques-Bonet, Tomas, Alkan, Can, Fu, Qiaomei, Mallick, Swapan, Li, Heng, Meyer, Matthias, Eichler, Evan E, Stoneking, Mark, Richards, Michael, Talamo, Sahra, Shunkov, Michael V, Derevianko, Anatoli P, Hublin, Jean-Jacques, Kelso, Janet, Slatkin, Montgomery

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Neandertal and Denisovan DNA from Pleistocene sediments by Slon, Viviane, Hopfe, Charlotte, Weiß, Clemens L., Mafessoni, Fabrizio, de la Rasilla, Marco, Lalueza-Fox, Carles, Rosas, Antonio, Soressi, Marie, Knul, Monika V., Miller, Rebecca, Stewart, John R., Derevianko, Anatoly P., Jacobs, Zenobia, Li, Bo, Roberts, Richard G., Shunkov, Michael V., de Lumley, Henry, Perrenoud, Christian, Gušić, Ivan, Kućan, Željko, Rudan, Pavao, Aximu-Petri, Ayinuer, Essel, Elena, Nagel, Sarah, Nickel, Birgit, Schmidt, Anna, Prüfer, Kay, Kelso, Janet, Burbano, Hernán A., Pääbo, Svante, Meyer, Matthias

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Patterns of Damage in Genomic DNA Sequences from a Neandertal by Briggs, Adrian W., Stenzel, Udo, Johnson, Philip L. F., Green, Richard E., Kelso, Janet, Prüfer, Kay, Meyer, Matthias, Krause, Johannes, Ronan, Michael T., Lachmann, Michael, Pääbo, Svante

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A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing by Green, Richard E., Malaspinas, Anna-Sapfo, Krause, Johannes, Briggs, Adrian W., Johnson, Philip L.F., Uhler, Caroline, Meyer, Matthias, Good, Jeffrey M., Maricic, Tomislav, Stenzel, Udo, Prüfer, Kay, Siebauer, Michael, Burbano, Hernán A., Ronan, Michael, Rothberg, Jonathan M., Egholm, Michael, Rudan, Pavao, Brajković, Dejana, Kućan, Željko, Gušić, Ivan, Wikström, Mårten, Laakkonen, Liisa, Kelso, Janet, Slatkin, Montgomery, Pääbo, Svante

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