Performance evaluation of the Vela Dx Sentosa next-generation sequencing system for HIV-1 DNA genotypic resistance

by Raymond, Stéphanie, Nicot, Florence, Abravanel, Florence, Minier, Luce, Carcenac, Romain, Lefebvre, Caroline, Harter, Agnès, Martin-Blondel, Guillaume, Delobel, Pierre, Izopet, Jacques
Published in Journal of clinical virology

Identification of a New HIV-1 BC Intersubtype Circulating Recombinant Form (CRF108_BC) in Spain

by Cañada, Javier E, Delgado, Elena, Gil, Horacio, Sánchez, Mónica, Benito, Sonia, García-Bodas, Elena, Gómez-González, Carmen, Canut-Blasco, Andrés, Portu-Zapirain, Joseba, Sáez de Adana, Ester, De la Peña, Mireia, Ibarra, Sofía, Cilla, Gustavo, Iribarren, José Antonio, Martínez-Sapiña, Ana, Thomson, Michael M
Published in Viruses

New HIV-1 circulating recombinant form 94: from phylogenetic detection of a large transmission cluster to prevention in the age of geosocial-networking apps in France, 2013 to 2017

by Wirden, Marc, De Oliveira, Fabienne, Bouvier-Alias, Magali, Lambert-Niclot, Sidonie, Chaix, Marie-Laure, Raymond, Stéphanie, Si-Mohammed, Ali, Alloui, Chakib, André-Garnier, Elisabeth, Bellecave, Pantxika, Malve, Brice, Mirand, Audrey, Pallier, Coralie, Poveda, Jean-Dominique, Rabenja, Theresa, Schneider, Veronique, Signori-Schmuck, Anne, Stefic, Karl, Calvez, Vincent, Descamps, Diane, Plantier, Jean-Christophe, Marcelin, Anne-Genevieve, Visseaux, Benoit
Published in Euro surveillance : bulletin européen sur les maladies transmissibles

Increased HIV-1 pretreatment drug resistance with consistent clade homogeneity among ART-naive HIV-1 infected individuals in Ethiopia

by Kiros, Mulugeta, Alemayehu, Dawit Hailu, Geberekidan, Eleni, Mihret, Adane, Maier, Melanie, Abegaz, Woldaregay Erku, Mulu, Andargachew
Published in Retrovirology

Defective HIV-1 Proviruses Are Expressed and Can Be Recognized by Cytotoxic T Lymphocytes, which Shape the Proviral Landscape

by Pollack, Ross A., Jones, R. Brad, Pertea, Mihaela, Bruner, Katherine M., Martin, Alyssa R., Thomas, Allison S., Capoferri, Adam A., Beg, Subul A., Huang, Szu-Han, Karandish, Sara, Hao, Haiping, Halper-Stromberg, Eitan, Yong, Patrick C., Kovacs, Colin, Benko, Erika, Siliciano, Robert F., Ho, Ya-Chi
Published in Cell host & microbe

Once‐daily darunavir/ritonavir 400/100 mg in triple therapy: efficacy and penetration in seminal compartment in ANRS‐165 DARULIGHT study

by Lê, Minh P., Chaix, Marie‐Laure, Raffi, François, Chevret, Sylvie, Gallien, Sébastien, Katlama, Christine, Delobel, Pierre, Yazdanpanah, Yazdan, Saillard, Juliette, Molina, Jean‐Michel, Peytavin, Gilles
Published in British journal of clinical pharmacology

Comprehensive Genetic Characterization of Four Novel HIV-1 Circulating Recombinant Forms (CRF129_56G, CRF130_A1B, CRF131_A1B, and CRF138_cpx): Insights from Molecular Epidemiology...

by Topcu, Cicek, Georgiou, Vasilis, Rodosthenous, Johana Hezka, Siakallis, Georgios, Gavala, Elena Katerina, Dimitriou, Christiana Reveka, Zeniou, Evgenia, Foley, Brian Thomas, Kostrikis, Leondios G
Published in Viruses

The biased nucleotide composition of HIV-1 triggers type I interferon response and correlates with subtype D increased pathogenicity

by Vabret, Nicolas, Bailly-Bechet, Marc, Najburg, Valérie, Müller-Trutwin, Michaela, Verrier, Bernard, Tangy, Frédéric
Published in PloS one

LSD1 cooperates with CTIP2 to promote HIV-1 transcriptional silencing

by Le Douce, Valentin, Colin, Laurence, Redel, Laetitia, Cherrier, Thomas, Herbein, Georges, Aunis, Dominique, Rohr, Olivier, Van Lint, Carine, Schwartz, Christian
Published in Nucleic acids research

The Two-Phase Emergence of Non Pandemic HIV-1 Group O in Cameroon

by Leoz, Marie, Feyertag, Felix, Kfutwah, Anfumbom, Mauclère, Philippe, Lachenal, Guillaume, Damond, Florence, De Oliveira, Fabienne, Lemée, Véronique, Simon, François, Robertson, David L, Plantier, Jean-Christophe
Published in PLoS pathogens

Relationships Between HIV Disease History and Blood HIV-1 DNA Load in Perinatally Infected Adolescents and Young Adults: The ANRS-EP38-IMMIP Study

by Avettand-Fenoel, Véronique, Blanche, Stéphane, Le Chenadec, Jérôme, Scott-Algara, Daniel, Dollfus, Catherine, Viard, Jean-Paul, Bouallag, Naima, Benmebarek, Yassine, Rivière, Yves, Warszawski, Josiane, Rouzioux, Christine, Buseyne, Florence
Published in The Journal of infectious diseases

Ancestral and consensus envelope immunogens for HIV-1 subtype C

by Kothe, Denise L., Li, Yingying, Decker, Julie M., Bibollet-Ruche, Frederic, Zammit, Kenneth P., Salazar, Maria G., Chen, Yalu, Weng, Zhiping, Weaver, Eric A., Gao, Feng, Haynes, Barton F., Shaw, George M., Korber, Bette T.M., Hahn, Beatrice H.
Published in Virology (New York, N.Y.)

2017 Update of the Drug Resistance Mutations in HIV-1

by Wensing, Annemarie M, Calvez, Vincent, Günthard, Huldrych F, Johnson, Victoria A, Paredes, Roger, Pillay, Deenan, Shafer, Robert W, Richman, Douglas D
Published in Topics in antiviral medicine

Global and regional molecular epidemiology of HIV-1, 1990–2015: a systematic review, global survey, and trend analysis

by Hemelaar, Joris, Elangovan, Ramyiadarsini, Dickson-Tetteh, Leslie, Fleminger, Isabella, Kirtley, Shona, Williams, Brian, Ghys, Peter D, Archibald, Chris, Barbás, María Gabriela, Barre-Sinoussi, Francoise, Barugahare, Banson, Birx, Deborah, Bobkov, Aleksei F, Buttò, Stefano, Carr, Jean, Carrera, Alex, Carrillo, Manuel Gómez, Charles, Macarthur, Chen, Zhiwei, Chijiwa, Katsumi, Cooper, David, de Gascun, Cillian F, Delgado, Elena, Dwyer, Dominic, Ellenberger, Dennis, Ensoli, Barbara, Gao, Feng, Fonjungo, Peter N, Foulongne, Vincent, Gadkari, Deepak A, García, Federico, Garsia, Roger, Gershy-Damet, Guy Michel, Grossman, Zehava, Hahn, Beatrice, Hamers, Raph L, Hamouda, Osamah, Herbeck, Joshua, Ito, Masahiko, Kaleebu, Pontiano Kaleebu, Kang, Chun, Kanki, Phyllis, Karasi, Jean-Claude, Kitayaporn, Dwip, Kucherer, Claudia, Leitner, Thomas, Liitsola, Kirsi, Lingappa, Jai, Linka, Marek, Lorenzana de Rivera, Ivette, Lukashov, Vladimir, Maayan, Shlomo, Meda, Nicolas, Menu, Elisabeth, Morgado, Mariza, Moussi, Awatef, Nasr, Mejda, Neilson, Joel R, Nerurkar, Vivek R, Novitsky, Vlad, Ofner, Marianna, Papa, Anna, Pape, Jean, Parkin, Neil, Parry, Chris, Pelletier, Alexandra, Pérez-Álvarez, Lucía, Pinto, Angie, Quang, Trinh Duy, Reynes, Jean-Marc, Rinke de Wit, Tobias, Robbins, Kenneth E, Rolland, Morgane, Salazar-Gonzales, Jesus, Salminen, Mika, Salomon, Horacio, Sandstrom, Paul, Sarr, Abdoulaye D, Schroeder, Bryan, Selhorst, Philippe, Sempala, Sylvester, Servais, Jean, Slim, Amine, Soares, Marcelo A, Songok, Elijah, Sutthent, Ruengpung, Takehisa, Jun, Thapa, Kiran, Thomson, Michael, Tran, Tyna, Urassa, Willy, Ushijima, Hiroshi, van Sighem, Ard, van Wijngaerden, Eric, Vercauteren, Jurgen, Wallace, Lesley, Xu, Jianqing, Yang, Chunfu, Zhang, Linqi, Zhang, Rong
Published in The Lancet infectious diseases

A quantitative approach for measuring the reservoir of latent HIV-1 proviruses

by Bruner, Katherine M, Wang, Zheng, Simonetti, Francesco R, Bender, Alexandra M, Kwon, Kyungyoon J, Sengupta, Srona, Fray, Emily J, Beg, Subul A, Antar, Annukka A R, Jenike, Katharine M, Bertagnolli, Lynn N, Capoferri, Adam A, Kufera, Joshua T, Timmons, Andrew, Nobles, Christopher, Gregg, John, Wada, Nikolas, Ho, Ya-Chi, Zhang, Hao, Margolick, Joseph B, Blankson, Joel N, Deeks, Steven G, Bushman, Frederic D, Siliciano, Janet D, Laird, Gregory M, Siliciano, Robert F
Published in Nature (London)

IFI16 Targets the Transcription Factor Sp1 to Suppress HIV-1 Transcription and Latency Reactivation

by Hotter, Dominik, Bosso, Matteo, Jønsson, Kasper L., Krapp, Christian, Stürzel, Christina M., Das, Atze, Littwitz-Salomon, Elisabeth, Berkhout, Ben, Russ, Alina, Wittmann, Sabine, Gramberg, Thomas, Zheng, Yue, Martins, Laura J., Planelles, Vicente, Jakobsen, Martin R., Hahn, Beatrice H., Dittmer, Ulf, Sauter, Daniel, Kirchhoff, Frank
Published in Cell host & microbe

Deworming helminth co-infected individuals for delaying HIV disease progression

by Walson, Judd L, Herrin, Bradley R, John-Stewart, Grace
Published in Cochrane database of systematic reviews

HIV-1 neutralizing antibody response and viral genetic diversity characterized with next generation sequencing

by Carter, Christoph C, Wagner, Gabriel A, Hightower, George K, Caballero, Gemma, Phung, Pham, Richman, Douglas D, Pond, Sergei L. Kosakovsky, Smith, Davey M
Published in Virology (New York, N.Y.)

Antiviral Activity of Bictegravir (GS-9883), a Novel Potent HIV-1 Integrase Strand Transfer Inhibitor with an Improved Resistance Profile

by Tsiang, Manuel, Jones, Gregg S, Goldsmith, Joshua, Mulato, Andrew, Hansen, Derek, Kan, Elaine, Tsai, Luong, Bam, Rujuta A, Stepan, George, Stray, Kirsten M, Niedziela-Majka, Anita, Yant, Stephen R, Yu, Helen, Kukolj, George, Cihlar, Tomas, Lazerwith, Scott E, White, Kirsten L, Jin, Haolun
Published in Antimicrobial agents and chemotherapy

Total HIV-1 DNA, a Marker of Viral Reservoir Dynamics with Clinical Implications

by Avettand-Fènoël, Véronique, Hocqueloux, Laurent, Ghosn, Jade, Cheret, Antoine, Frange, Pierre, Melard, Adeline, Viard, Jean-Paul, Rouzioux, Christine
Published in Clinical microbiology reviews