From telomere to telomere: The transcriptional and epigenetic state of human repeat elements

by Hoyt, Savannah J, Storer, Jessica M, Hartley, Gabrielle A, Grady, Patrick G S, Gershman, Ariel, de Lima, Leonardo G, Limouse, Charles, Halabian, Reza, Wojenski, Luke, Rodriguez, Matias, Altemose, Nicolas, Rhie, Arang, Core, Leighton J, Gerton, Jennifer L, Makalowski, Wojciech, Olson, Daniel, Rosen, Jeb, Smit, Arian F A, Straight, Aaron F, Vollger, Mitchell R, Wheeler, Travis J, Schatz, Michael C, Eichler, Evan E, Phillippy, Adam M, Timp, Winston, Miga, Karen H, O'Neill, Rachel J
Published in Science (American Association for the Advancement of Science)

Phylogenomics from Whole Genome Sequences Using aTRAM

by Allen, Julie M., Boyd, Bret, Nguyen, Nam-Phuong, Vachaspati, Pranjal, Warnow, Tandy, Huang, Daisie I., Grady, Patrick G. S., Bell, Kayce C., Cronk, Quentin C. B., Mugisha, Lawrence, Pittendrigh, Barry R., Leonardi, M. Soledad, Reed, David L., Johnson, Kevin P.
Published in Systematic biology

Multifaceted genome control by Set1 Dependent and Independent of H3K4 methylation and the Set1C/COMPASS complex

by Mikheyeva, Irina V, Grady, Patrick J R, Tamburini, Fiona B, Lorenz, David R, Cam, Hugh P
Published in PLoS genetics

BodyPressure - Inferring Body Pose and Contact Pressure From a Depth Image

by Clever, Henry M., Grady, Patrick L., Turk, Greg, Kemp, Charles C.
Published in IEEE transactions on pattern analysis and machine intelligence

Deep statistical modelling of nanopore sequencing translocation times reveals latent non-B DNA structures

by Hosseini, Marjan, Palmer, Aaron, Manka, William, Grady, Patrick G S, Patchigolla, Venkata, Bi, Jinbo, O’Neill, Rachel J, Chi, Zhiyi, Aguiar, Derek
Published in Bioinformatics (Oxford, England)

The complete sequence of a human Y chromosome

by Rhie, Arang, Nurk, Sergey, Cechova, Monika, Hoyt, Savannah J, Taylor, Dylan J, Altemose, Nicolas, Hook, Paul W, Koren, Sergey, Rautiainen, Mikko, Alexandrov, Ivan A, Allen, Jamie, Asri, Mobin, Bzikadze, Andrey V, Chen, Nae-Chyun, Chin, Chen-Shan, Diekhans, Mark, Flicek, Paul, Formenti, Giulio, Fungtammasan, Arkarachai, Garcia Giron, Carlos, Garrison, Erik, Gershman, Ariel, Gerton, Jennifer L, Grady, Patrick G S, Guarracino, Andrea, Haggerty, Leanne, Halabian, Reza, Hansen, Nancy F, Harris, Robert, Hartley, Gabrielle A, Harvey, William T, Haukness, Marina, Heinz, Jakob, Hourlier, Thibaut, Hubley, Robert M, Hunt, Sarah E, Hwang, Stephen, Jain, Miten, Kesharwani, Rupesh K, Lewis, Alexandra P, Li, Heng, Logsdon, Glennis A, Lucas, Julian K, Makalowski, Wojciech, Markovic, Christopher, Martin, Fergal J, Mc Cartney, Ann M, McCoy, Rajiv C, McDaniel, Jennifer, McNulty, Brandy M, Medvedev, Paul, Mikheenko, Alla, Munson, Katherine M, Murphy, Terence D, Olsen, Hugh E, Olson, Nathan D, Paulin, Luis F, Porubsky, David, Potapova, Tamara, Ryabov, Fedor, Salzberg, Steven L, Sauria, Michael E G, Sedlazeck, Fritz J, Shafin, Kishwar, Shepelev, Valery A, Shumate, Alaina, Storer, Jessica M, Surapaneni, Likhitha, Taravella Oill, Angela M, Thibaud-Nissen, Françoise, Timp, Winston, Tomaszkiewicz, Marta, Vollger, Mitchell R, Walenz, Brian P, Watwood, Allison C, Weissensteiner, Matthias H, Wenger, Aaron M, Wilson, Melissa A, Zarate, Samantha, Zhu, Yiming, Zook, Justin M, Eichler, Evan E, O'Neill, Rachel J, Schatz, Michael C, Miga, Karen H, Makova, Kateryna D, Phillippy, Adam M
Published in Nature (London)

Anchored Hybrid Enrichment-Based Phylogenomics of Leafhoppers and Treehoppers (Hemiptera: Cicadomorpha: Membracoidea)

by Dietrich, Christopher H., Allen, Julie M., Lemmon, Alan R., Lemmon, Emily Moriarty, Takiya, Daniela M., Evangelista, Olivia, Walden, Kimberly K. O., Grady, Patrick G. S., Johnson, Kevin P.
Published in Insect systematics and diversity

A rapid, cost-effective tailed amplicon method for sequencing SARS-CoV-2

by Gohl, Daryl M, Garbe, John, Grady, Patrick, Daniel, Jerry, Watson, Ray H B, Auch, Benjamin, Nelson, Andrew, Yohe, Sophia, Beckman, Kenneth B
Published in BMC genomics

Profiling genome‐wide methylation in two maples: Fine‐scale approaches to detection with nanopore technology

by McEvoy, Susan L., Grady, Patrick G. S., Pauloski, Nicole, O'Neill, Rachel J., Wegrzyn, Jill L.
Published in Evolutionary applications

Use of del Nido Cardioplegia for Adult Cardiac Surgery at the Cleveland Clinic: Perfusion Implications

by Kim, Kuna, Ball, Clifford, Grady, Patrick, Mick, Stephanie
Published in The Journal of extra-corporeal technology

Heterochromatin assembly and transcriptome repression by Set1 in coordination with a class II histone deacetylase

by Lorenz, David R, Meyer, Lauren F, Grady, Patrick J R, Meyer, Michelle M, Cam, Hugh P
Published in eLife

Restriction of Retrotransposon Mobilization in Schizosaccharomyces pombe by Transcriptional Silencing and Higher-Order Chromatin Organization

by Murton, Heather E, Grady, Patrick J R, Chan, Tsun Ho, Cam, Hugh P, Whitehall, Simon K
Published in Genetics (Austin)

Learning to Collaborate From Simulation for Robot-Assisted Dressing

by Clegg, Alexander, Erickson, Zackory, Grady, Patrick, Turk, Greg, Kemp, Charles C., Liu, C. Karen
Published in IEEE robotics and automation letters

Novel technique for airless connection of artificial heart to vascular conduits

by Karimov, Jamshid H., Gao, Shengqiang, Dessoffy, Raymond, Sunagawa, Gengo, Sinkewich, Martin, Grady, Patrick, Sale, Shiva, Moazami, Nader, Fukamachi, Kiyotaka
Published in Journal of artificial organs

Moderate hypothermia technique for chronic implantation of a total artificial heart in calves

by Karimov, Jamshid H., Grady, Patrick, Sinkewich, Martin, Sunagawa, Gengo, Dessoffy, Raymond, Byram, Nicole, Moazami, Nader, Fukamachi, Kiyotaka
Published in Journal of artificial organs

Phylogeny, systematics and biogeography of the genus panolis (lepidoptera: noctuidae) based on morphological and molecular evidence

by Wang, Houshuai, Fan, Xiaoling, Owada, Mamoru, Wang, Min, Nylin, Sören
Published in PloS one

Using Semantic Web Technologies to Enable Cancer Genomics Discovery at Petabyte Scale

by Cejovic, Jovan, Radenkovic, Jelena, Mladenovic, Vladimir, Stanojevic, Adam, Miletic, Milica, Radanovic, Stevan, Bajcic, Dragan, Djordjevic, Dragan, Jelic, Filip, Nesic, Milos, Lau, Jessica, Grady, Patrick, Groves-Kirkby, Nick, Kural, Deniz, Davis-Dusenbery, Brandi
Published in Cancer Informatics

The complete sequence of a human genome

by Nurk, Sergey, Koren, Sergey, Rhie, Arang, Rautiainen, Mikko, Bzikadze, Andrey V, Mikheenko, Alla, Vollger, Mitchell R, Altemose, Nicolas, Uralsky, Lev, Gershman, Ariel, Aganezov, Sergey, Hoyt, Savannah J, Diekhans, Mark, Logsdon, Glennis A, Alonge, Michael, Antonarakis, Stylianos E, Borchers, Matthew, Bouffard, Gerard G, Brooks, Shelise Y, Caldas, Gina V, Chen, Nae-Chyun, Cheng, Haoyu, Chin, Chen-Shan, Chow, William, de Lima, Leonardo G, Dishuck, Philip C, Durbin, Richard, Dvorkina, Tatiana, Fiddes, Ian T, Formenti, Giulio, Fulton, Robert S, Fungtammasan, Arkarachai, Garrison, Erik, Grady, Patrick G S, Graves-Lindsay, Tina A, Hall, Ira M, Hansen, Nancy F, Hartley, Gabrielle A, Haukness, Marina, Howe, Kerstin, Hunkapiller, Michael W, Jain, Chirag, Jain, Miten, Jarvis, Erich D, Kerpedjiev, Peter, Kirsche, Melanie, Kolmogorov, Mikhail, Korlach, Jonas, Kremitzki, Milinn, Li, Heng, Maduro, Valerie V, Marschall, Tobias, McCartney, Ann M, McDaniel, Jennifer, Miller, Danny E, Mullikin, James C, Myers, Eugene W, Olson, Nathan D, Paten, Benedict, Peluso, Paul, Pevzner, Pavel A, Porubsky, David, Potapova, Tamara, Rogaev, Evgeny I, Rosenfeld, Jeffrey A, Salzberg, Steven L, Schneider, Valerie A, Sedlazeck, Fritz J, Shafin, Kishwar, Shew, Colin J, Shumate, Alaina, Sims, Ying, Smit, Arian F A, Soto, Daniela C, Sović, Ivan, Storer, Jessica M, Streets, Aaron, Sullivan, Beth A, Thibaud-Nissen, Françoise, Torrance, James, Wagner, Justin, Walenz, Brian P, Wenger, Aaron, Wood, Jonathan M D, Xiao, Chunlin, Yan, Stephanie M, Young, Alice C, Zarate, Samantha, Surti, Urvashi, McCoy, Rajiv C, Dennis, Megan Y, Alexandrov, Ivan A, Gerton, Jennifer L, O'Neill, Rachel J, Timp, Winston, Zook, Justin M, Schatz, Michael C, Eichler, Evan E, Miga, Karen H, Phillippy, Adam M
Published in Science (American Association for the Advancement of Science)

Efficacy of the Hepcon System in Reducing Hemorrhagic and Thrombotic Complications in Antiphospholipid Syndrome Patients Undergoing Cardiac Surgery Requiring Cardiopulmonary Bypass

by Sheu, Michael, Wei, Wei, Granat, Lauren M, Apostolakis, John, Grady, Patrick M, Angelini, Dana E.
Published in Blood

Surfactant Assemblies on Selected Nanostructured Surfaces: Evidence, Driving Forces, and Applications

by Striolo, Alberto, Grady, Brian Patrick
Published in Langmuir