Sample Identifiers and Metadata to Support Data Management and Reuse in Multidisciplinary Ecosystem Sciences

by Damerow, Joan E, Varadharajan, Charuleka, Boye, Kristin, Brodie, Eoin L, Burrus, Madison, Chadwick, K. Dana, Crystal-Ornelas, Robert, Elbashandy, Hesham, Alves, Ricardo J. Eloy, Ely, Kim S, Goldman, Amy E, Haberman, Ted, Hendrix, Valerie, Kakalia, Zarine, Kemner, Kenneth M, Kersting, Annie B, Merino, Nancy, O'Brien, Fianna, Perzan, Zach, Robles, Emily, Sorensen, Patrick, Stegen, James C, Walls, Ramona L, Weisenhorn, Pamela, Zavarin, Mavrik, Agarwal, Deborah
Published in Data science journal

Ecological consistency of SSU rRNA-based operational taxonomic units at a global scale

by Schmidt, Thomas S B, Matias Rodrigues, João F, von Mering, Christian
Published in PLoS computational biology

Event extraction of bacteria biotopes: a knowledge-intensive NLP-based approach

by Ratkovic, Zorana, Golik, Wiktoria, Warnier, Pierre
Published in BMC bioinformatics

Urban Expressway Renewal Strategy Based on Knowledge Graphs

by Zhu, Min, Zhou, Wenbo, Yuan, Tengfei
Published in Applied sciences

Sustainable Alternative Composites Using Waste Vegetable Oil Based Resins

by Fernandes, Felipe C., Kirwan, Kerry, Wilson, Peter R., Coles, Stuart R.
Published in Journal of polymers and the environment

Open science resources for the discovery and analysis of Tara Oceans data

by Pesant, Stéphane, Not, Fabrice, Picheral, Marc, Kandels-Lewis, Stefanie, Le Bescot, Noan, Gorsky, Gabriel, Iudicone, Daniele, Karsenti, Eric, Speich, Sabrina, Troublé, Romain, Dimier, Céline, Searson, Sarah
Published in Scientific data

Liver transcriptome resources of four commercially exploited teleost species

by Machado, André M, Muñoz-Merida, Antonio, Fonseca, Elza, Veríssimo, Ana, Pinto, Rui, Felício, Mónica, da Fonseca, Rute R, Froufe, Elsa, Castro, L Filipe C
Published in Scientific data

Development of an Intervention Setting Ontology for behaviour change: Specifying where interventions take place

by Norris, Emma, Marques, Marta M, Finnerty, Ailbhe N, Wright, Alison J, West, Robert, Hastings, Janna, Williams, Poppy, Carey, Rachel N, Kelly, Michael P, Johnston, Marie, Michie, Susan
Published in Wellcome open research

MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources

by Tsesmetzis, Nicolas, Yilmaz, Pelin, Marks, Peter C, Kyrpides, Nikos C, Head, Ian M, Lomans, Bart P
Published in Environmental microbiome

A Schema for Digitized Surface Swab Site Metadata in Open-Source DNA Sequence Databases

by Feng, Jingzhang, Daeschel, Devin, Dooley, Damion, Griffiths, Emma, Allard, Marc, Timme, Ruth, Chen, Yi, Snyder, Abigail B
Published in mSystems

EukRef: Phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution

by Del Campo, Javier, Kolisko, Martin, Boscaro, Vittorio, Santoferrara, Luciana F, Nenarokov, Serafim, Massana, Ramon, Guillou, Laure, Simpson, Alastair, Berney, Cedric, de Vargas, Colomban, Brown, Matthew W, Keeling, Patrick J, Wegener Parfrey, Laura
Published in PLoS biology

Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans

by Lang-Yona, Naama, Flores, J. Michel, Haviv, Rotem, Alberti, Adriana, Poulain, Julie, Belser, Caroline, Trainic, Miri, Gat, Daniella, Ruscheweyh, Hans-Joachim, Wincker, Patrick, Sunagawa, Shinichi, Rudich, Yinon, Koren, Ilan, Vardi, Assaf
Published in Communications earth & environment

FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration

by Dooley, Damion M, Griffiths, Emma J, Gosal, Gurinder S, Buttigieg, Pier L, Hoehndorf, Robert, Lange, Matthew C, Schriml, Lynn M, Brinkman, Fiona S L, Hsiao, William W L
Published in NPJ science of food

Identification of Habitat-Specific Biomes of Aquatic Fungal Communities Using a Comprehensive Nearly Full-Length 18S rRNA Dataset Enriched with Contextual Data

by Panzer, Katrin, Yilmaz, Pelin, Weiß, Michael, Reich, Lothar, Richter, Michael, Wiese, Jutta, Schmaljohann, Rolf, Labes, Antje, Imhoff, Johannes F, Glöckner, Frank Oliver, Reich, Marlis
Published in PloS one

Omnicrobe, an open-access database of microbial habitats and phenotypes using a comprehensive text mining and data fusion approach

by Dérozier, Sandra, Bossy, Robert, Deléger, Louise, Ba, Mouhamadou, Chaix, Estelle, Harlé, Olivier, Loux, Valentin, Falentin, Hélène, Nédellec, Claire
Published in PloS one

Biomass Energy in Malaysia: Current Scenario, Policies, and Implementation Challenges

by Rashidi, Nor Adilla, Chai, Yee Ho, Yusup, Suzana
Published in Bioenergy research

Airborne particles, bacterial and fungal communities insights of two museum exhibition halls with diverse air quality characteristics

by Saridaki, Aggeliki, Glytsos, Thodoros, Raisi, Louiza, Katsivela, Eleftheria, Tsiamis, George, Kalogerakis, Nicolas, Lazaridis, Mihalis
Published in Aerobiologia

They Must Have Done Something! Socioeconomic Status and Citizens' Support for the Victims of Violence

by Zizumbo-Colunga, Daniel
Published in Victims & offenders

Enhancing the FAIRness of Arctic Research Data Through Semantic Annotation

by Chong, Steven S., Schildhauer, Mark, O’Brien, Margaret, Mecum, Bryce, Jones, Matthew B.
Published in Data science journal

Emerging semantics to link phenotype and environment

by Thessen, Anne E, Bunker, Daniel E, Buttigieg, Pier Luigi, Cooper, Laurel D, Dahdul, Wasila M, Domisch, Sami, Franz, Nico M, Jaiswal, Pankaj, Lawrence-Dill, Carolyn J, Midford, Peter E, Mungall, Christopher J, Ramírez, Martín J, Specht, Chelsea D, Vogt, Lars, Vos, Rutger Aldo, Walls, Ramona L, White, Jeffrey W, Zhang, Guanyang, Deans, Andrew R, Huala, Eva, Lewis, Suzanna E, Mabee, Paula M
Published in PeerJ (San Francisco, CA)