Unmanned Aerial Vehicles for High-Throughput Phenotyping and Agronomic Research

by Shi, Yeyin, Thomasson, J Alex, Murray, Seth C, Pugh, N Ace, Rooney, William L, Shafian, Sanaz, Rajan, Nithya, Rouze, Gregory, Morgan, Cristine L S, Neely, Haly L, Rana, Aman, Bagavathiannan, Muthu V, Henrickson, James, Bowden, Ezekiel, Valasek, John, Olsenholler, Jeff, Bishop, Michael P, Sheridan, Ryan, Putman, Eric B, Popescu, Sorin, Burks, Travis, Cope, Dale, Ibrahim, Amir, McCutchen, Billy F, Baltensperger, David D, Avant, Jr, Robert V, Vidrine, Misty, Yang, Chenghai
Published in PloS one

Stromal Cells Derived from Visceral and Obese Adipose Tissue Promote Growth of Ovarian Cancers

by Zhang, Yan, Nowicka, Aleksandra, Solley, Travis N, Wei, Caimiao, Parikh, Aaroh, Court, Laurence, Burks, Jared K, Andreeff, Michael, Woodward, Wendy A, Dadbin, Ali, Kolonin, Mikhail G, Lu, Karen H, Klopp, Ann H
Published in PloS one

The Influence of Hormonal Factors on the Risk of Developing Cervical Cancer and Pre-Cancer: Results from the EPIC Cohort

by Roura, Esther, Travier, Noémie, Waterboer, Tim, de Sanjosé, Silvia, Bosch, F Xavier, Pawlita, Michael, Pala, Valeria, Weiderpass, Elisabete, Margall, Núria, Dillner, Joakim, Gram, Inger T, Tjønneland, Anne, Munk, Christian, Palli, Domenico, Khaw, Kay-Tee, Overvad, Kim, Clavel-Chapelon, Françoise, Mesrine, Sylvie, Fournier, Agnès, Fortner, Renée T, Ose, Jennifer, Steffen, Annika, Trichopoulou, Antonia, Lagiou, Pagona, Orfanos, Philippos, Masala, Giovanna, Tumino, Rosario, Sacerdote, Carlotta, Polidoro, Silvia, Mattiello, Amalia, Lund, Eiliv, Peeters, Petra H, Bueno-de-Mesquita, H B as, Quirós, J Ramón, Sánchez, María-José, Navarro, Carmen, Barricarte, Aurelio, Larrañaga, Nerea, Ekström, Johanna, Lindquist, David, Idahl, Annika, Travis, Ruth C, Merritt, Melissa A, Gunter, Marc J, Rinaldi, Sabina, Tommasino, Massimo, Franceschi, Silvia, Riboli, Elio, Castellsagué, Xavier
Published in PloS one

Systematic comparison of single-cell and single-nucleus RNA-sequencing methods

by Ding, Jiarui, Adiconis, Xian, Simmons, Sean K, Kowalczyk, Monika S, Hession, Cynthia C, Marjanovic, Nemanja D, Hughes, Travis K, Wadsworth, Marc H, Burks, Tyler, Nguyen, Lan T, Kwon, John Y H, Barak, Boaz, Ge, William, Kedaigle, Amanda J, Carroll, Shaina, Li, Shuqiang, Hacohen, Nir, Rozenblatt-Rosen, Orit, Shalek, Alex K, Villani, Alexandra-Chloé, Regev, Aviv, Levin, Joshua Z
Published in Nature biotechnology

Differential expression of miRNAs involved in biological processes responsible for inflammation and immune response in lichen sclerosus urethral stricture disease

by Kohli, Harjivan, Childs, Brandon, Sullivan, Travis B, Shevtsov, Artem, Burks, Eric, Kalantzakos, Thomas, Rieger-Christ, Kimberly, Vanni, Alex J
Published in PloS one

Identification of a novel human papillomavirus by metagenomic analysis of samples from patients with febrile respiratory illness

by Mokili, John L, Dutilh, Bas E, Lim, Yan Wei, Schneider, Bradley S, Taylor, Travis, Haynes, Matthew R, Metzgar, David, Myers, Christopher A, Blair, Patrick J, Nosrat, Bahador, Wolfe, Nathan D, Rohwer, Forest
Published in PloS one

Vascular invasion identifies the most aggressive histologic subset of stage I lung adenocarcinoma: Implications for adjuvant therapy

by Yambayev, Ilyas, Sullivan, Travis B., Rieger-Christ, Kimberly M., Servais, Elliot L., Stock, Cameron T., Quadri, Syed M., Sands, Jacob M., Suzuki, Kei, Burks, Eric J.
Published in Lung cancer (Amsterdam, Netherlands)

The Molecular Taxonomy of Primary Prostate Cancer

by Abeshouse, Adam, Akbani, Rehan, Ally, Adrian, Andry, Christopher D., Auman, J. Todd, Beroukhim, Rameen, Boutros, Paul C., Bradley, Robert K., Bristow, Christopher A., Bryce, Alan H., Butterfield, Yaron S.N., Button, Michael, Carroll, Peter R., Carter, Scott L., Carver, Brett S., Chan, June M., Chen, Yu, Cherniack, Andrew D., Cibulskis, Kristian, Ciriello, Giovanni, Costello, Anthony J., Dvinge, Heidi, Felau, Ina, Gardner, Johanna, Gehlenborg, Nils, Graefen, Markus, Guin, Ranabir, Gupta, Manaswi, Hadjipanayis, Angela, Hayes, D. Neil, Heiman, David I., Hoadley, Katherine A., Holbrook, Andrea H., Hoyle, Alan P., Huang, Mei, Ittmann, Michael, Kahles, Andre, Kane, Christopher J., Kerger, Michael, Klein, Robert J., Lai, Phillip H., Laird, Peter W., Lander, Eric S., Latour, Mathieu, Lawrence, Michael S., Lau, Kevin, LeBien, Tucker, Leraas, Kristen M., Lin, Pei, Linehan, W. Marston, Lolla, Laxmi, Longacre, Teri, Lu, Yiling, Mallery, David, Mariamidze, Armaz, Meng, Shaowu, Meyerson, Matthew, Mieczkowski, Piotr A., Mills, Gordon B., Minner, Sarah, Morrison, Carl, Naresh, Rashi, Nelson, Joel, Nelson, Peter S., Newton, Yulia, Noushmehr, Houtan, Parfenov, Michael, Park, Peter J., Piché, Alain, Rathmell, W. Kimryn, Reynolds, Sheila M., Roach, Jeffrey, Robertson, A. Gordon, Sadeghi, Sara, Scarlata, Eleonora, Shen, Ronglai, Shi, Yan, Shih, Juliann, Skelly, Tara, Sofia, Heidi J., Stewart, Chip, Sun, Charlie, Tan, Donghui, Taylor, Barry S., Teebagy, Patrick, Têtu, Bernard, Thiessen, Nina, Tirapelli, Daniela P., Tomlins, Scott A., Trevisan, Felipe Amstalden, True, Lawrence D., Weinhold, Nils, Wilkerson, Matthew D., Wu, Junyuan, Wu, Ye, Xu, Andrew W., Yadav, Shalini S., Yang, Lixing, Yena, Peggy, Zeng, Thomas
Published in Cell

Vascular Invasion Predicts Recurrence in Stage IA2-IB Lung Adenocarcinoma but not Squamous Cell Carcinoma

by Suaiti, Lubna, Sullivan, Travis B., Rieger-Christ, Kimberly M., Servais, Elliot L., Suzuki, Kei, Burks, Eric J.
Published in Clinical lung cancer

Comprehensive molecular profiling of lung adenocarcinoma

Published in Nature (London)

MicroRNA Associated with the Invasive Phenotype in Clear Cell Renal Cell Carcinoma: Let-7c-5p Inhibits Proliferation, Migration, and Invasion by Targeting Insulin-like Growth Facto...

by Kalantzakos, Thomas J, Sebel, Luke E, Trussler, James, Sullivan, Travis B, Burks, Eric J, Sarita-Reyes, Carmen D, Canes, David, Moinzadeh, Alireza, Rieger-Christ, Kimberly M
Published in Biomedicines

Abstract 3530: Gene expression alterations associated with histologic aggressiveness in stage I lung adenocarcinomas

by Zhang, Jiarui, Burks, Eric, Beane, Jennifer, Sullivan, Travis, Liu, Gang, Dubinett, Steven, Lenburg, Marc, Spira, Avrum
Published in Cancer research (Chicago, Ill.)

Beyond Spatial Transcriptomics: Tissue Systems Biology

by Burks, Jared, Chanthaphavong, Savanh, Hollman, Travis, Loomis, Cynthia, Mezzano, Valeria
Published in Journal of biomolecular techniques

MicroRNA Expression Profiles in Upper Tract Urothelial Carcinoma Differentiate Tumor Grade, Stage, and Survival: Implications for Clinical Decision-Making

by Browne, Brendan M., Stensland, Kristian D., Patel, Chintan K., Sullivan, Travis, Burks, Eric J., Canes, David, Raman, Jay D., Warrick, Joshua, Reiger-Christ, Kimberly M.
Published in Urology (Ridgewood, N.J.)

Pathologic and gene expression comparison of CT- screen detected and routinely detected stage I/0 lung adenocarcinoma in NCCN risk-matched cohorts

by Burks, Eric J., Zhang, Jiarui, Sullivan, Travis B., Shi, Xingyi, Sands, Jacob M., Regis, Shawn M., McKee, Brady J., McKee, Andrea B., Zhang, Sherry, Liu, Hanqiao, Liu, Gang, Spira, Avrum, Beane, Jennifer, Lenburg, Marc E., Rieger-Christ, Kimberly M.
Published in Cancer treatment and research communications

Vascular invasion predicts the subgroup of lung adenocarcinomas ≤2.0 cm at risk of poor outcome treated by wedge resection compared to lobectomy

by Ma, Lina, Sullivan, Travis B, Rieger-Christ, Kimberly M, Yambayev, Ilyas, Zhao, Qing, Higgins, Sara E, Yilmaz, Osman H, Sultan, Lila, Servais, Elliot L, Suzuki, Kei, Burks, Eric J
Published in JTCVS open

MicroRNA profile in stage I clear cell renal cell carcinoma predicts progression to metastatic disease

by Moynihan, Matthew J., Sullivan, Travis B., Burks, Eric, Schober, Jared, Calabrese, Marc, Fredrick, Ariel, Kalantzakos, Thomas, Warrick, Joshua, Canes, David, Raman, Jay D., Rieger-Christ, Kimberly
Published in Urologic oncology

Urinary microbiome differences between lichen sclerosus induced and non-lichen sclerosus induced urethral stricture disease

by Jamil, Marcus L., Perecman, Aaron, Sherman, Amanda, Sullivan, Travis, Christ, Kimberly, Hansma, Alexandra, Burks, Eric, Vanni, Alex J.
Published in World journal of urology

Outcomes after endovascular mechanical thrombectomy for low compared to high National Institutes of Health Stroke Scale (NIHSS): A multicenter study

by Abecassis, Isaac Josh, Almallouhi, Eyad, Chalhoub, Reda, Kasab, Sami Al, Bass, Eric, Ding, Dale, Saini, Vasu, Burks, Joshua D., Maier, Ilko L., Psychogios, Marios-Nikos, Liman, Jan, Alawieh, Ali, Wolfe, Stacey, Arthur, Adam S., Shaban, Amir, Dumont, Travis, Kan, Peter, Kim, Joon-Tae, De Leacy, Reade, Osbun, Joshua, Rai, Ansaar, Jabbour, Pascal, Grossberg, Jonathan A., Park, Min S., Crosa, Roberto, Mascitelli, Justin, Levitt, Michael R., Polifka, Adam, Casagrande, Walter, Yoshimura, Shinichi, Matouk, Charles, Williamson, Richard W., Gory, Benjamin, Mokin, Maxim, Fragata, Isabel, Romano, Daniele G., Chowdry, Shakeel, Moss, Mark, Behme, Daniel, Limaye, Kaustubh, Spiotta, Alejandro M., Starke, Robert M.
Published in Clinical neurology and neurosurgery

Author Correction: Systematic comparison of single-cell and single-nucleus RNA-sequencing methods

by Ding, Jiarui, Adiconis, Xian, Simmons, Sean K, Kowalczyk, Monika S, Hession, Cynthia C, Marjanovic, Nemanja D, Hughes, Travis K, Wadsworth, Marc H, Burks, Tyler, Nguyen, Lan T, Kwon, John Y H, Barak, Boaz, Ge, William, Kedaigle, Amanda J, Carroll, Shaina, Li, Shuqiang, Hacohen, Nir, Rozenblatt-Rosen, Orit, Shalek, Alex K, Villani, Alexandra-Chloé, Regev, Aviv, Levin, Joshua Z
Published in Nature biotechnology