Repetitive DNA Profiles Reveal Evidence of Rapid Genome Evolution and Reflect Species Boundaries in Ground Beetles

by Sproul, John S., Barton, Lindsey M., Maddison, David R.
Published in Systematic biology

Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness

by Iyer, Shilpa S., Bibollet-Ruche, Frederic, Sherrill-Mix, Scott, Learn, Gerald H., Plenderleith, Lindsey, Smith, Andrew G., Barbian, Hannah J., Russell, Ronnie M., Gondim, Marcos V. P., Bahari, Catherine Y., Shaw, Christiana M., Li, Yingying, Decker, Timothy, Haynes, Barton F., Shaw, George M., Sharp, Paul M., Borrow, Persephone, Hahn, Beatrice H.
Published in Proceedings of the National Academy of Sciences - PNAS

Genetics of rheumatoid arthritis contributes to biology and drug discovery

by Okada, Yukinori, Wu, Di, Trynka, Gosia, Raj, Towfique, Terao, Chikashi, Ikari, Katsunori, Kochi, Yuta, Ohmura, Koichiro, Suzuki, Akari, Yoshida, Shinji, Graham, Robert R, Manoharan, Arun, Ortmann, Ward, Bhangale, Tushar, Denny, Joshua C, Carroll, Robert J, Eyler, Anne E, Greenberg, Jeffrey D, Kremer, Joel M, Pappas, Dimitrios A, Jiang, Lei, Yin, Jian, Ye, Lingying, Su, Ding-Feng, Yang, Jian, Xie, Gang, Keystone, Ed, Westra, Harm-Jan, Esko, Tõnu, Metspalu, Andres, Zhou, Xuezhong, Gupta, Namrata, Mirel, Daniel, Stahl, Eli A, Diogo, Dorothée, Cui, Jing, Liao, Katherine, Guo, Michael H, Myouzen, Keiko, Kawaguchi, Takahisa, Coenen, Marieke J H, van Riel, Piet L C M, van de Laar, Mart A F J, Guchelaar, Henk-Jan, Huizinga, Tom W J, Dieudé, Philippe, Mariette, Xavier, Bridges, Jr, S Louis, Zhernakova, Alexandra, Toes, Rene E M, Tak, Paul P, Miceli-Richard, Corinne, Bang, So-Young, Lee, Hye-Soon, Martin, Javier, Gonzalez-Gay, Miguel A, Rodriguez-Rodriguez, Luis, Rantapää-Dahlqvist, Solbritt, Arlestig, Lisbeth, Choi, Hyon K, Kamatani, Yoichiro, Galan, Pilar, Lathrop, Mark, Eyre, Steve, Bowes, John, Barton, Anne, de Vries, Niek, Moreland, Larry W, Criswell, Lindsey A, Karlson, Elizabeth W, Taniguchi, Atsuo, Yamada, Ryo, Kubo, Michiaki, Liu, Jun S, Bae, Sang-Cheol, Worthington, Jane, Padyukov, Leonid, Klareskog, Lars, Gregersen, Peter K, Raychaudhuri, Soumya, Stranger, Barbara E, De Jager, Philip L, Franke, Lude, Visscher, Peter M, Brown, Matthew A, Yamanaka, Hisashi, Mimori, Tsuneyo, Takahashi, Atsushi, Xu, Huji, Behrens, Timothy W, Siminovitch, Katherine A, Momohara, Shigeki, Matsuda, Fumihiko, Yamamoto, Kazuhiko, Plenge, Robert M
Published in Nature (London)

Diversion of HIV-1 vaccine–induced immunity by gp41-microbiota cross-reactive antibodies

by Williams, Wilton B., Liao, Hua-Xin, Moody, M. Anthony, Kepler, Thomas B., Alam, S. Munir, Gao, Feng, Wiehe, Kevin, Trama, Ashley M., Jones, Kathryn, Zhang, Ruijun, Song, Hongshuo, Marshall, Dawn J., Whitesides, John F., Sawatzki, Kaitlin, Hua, Axin, Liu, Pinghuang, Tay, Matthew Z., Seaton, Kelly E., Shen, Xiaoying, Foulger, Andrew, Lloyd, Krissey E., Parks, Robert, Pollara, Justin, Ferrari, Guido, Yu, Jae-Sung, Vandergrift, Nathan, Montefiori, David C., Sobieszczyk, Magdalena E., Hammer, Scott, Karuna, Shelly, Gilbert, Peter, Grove, Doug, Grunenberg, Nicole, McElrath, M. Juliana, Mascola, John R., Koup, Richard A., Corey, Lawrence, Nabel, Gary J., Morgan, Cecilia, Churchyard, Gavin, Maenza, Janine, Keefer, Michael, Graham, Barney S., Baden, Lindsey R., Tomaras, Georgia D., Haynes, Barton F.
Published in Science (American Association for the Advancement of Science)

Completeness of HIV-1 Envelope Glycan Shield at Transmission Determines Neutralization Breadth

by Wagh, Kshitij, Kreider, Edward F., Li, Yingying, Barbian, Hannah J., Learn, Gerald H., Giorgi, Elena, Hraber, Peter T., Decker, Timothy G., Smith, Andrew G., Gondim, Marcos V., Gillis, Lindsey, Wandzilak, Jamie, Chuang, Gwo-Yu, Rawi, Reda, Cai, Fangping, Pellegrino, Pierre, Williams, Ian, Overbaugh, Julie, Gao, Feng, Kwong, Peter D., Haynes, Barton F., Shaw, George M., Borrow, Persephone, Seaman, Michael S., Hahn, Beatrice H., Korber, Bette
Published in Cell reports (Cambridge)

Trivalent mosaic or consensus HIV immunogens prime humoral and broader cellular immune responses in adults

by Cohen, Kristen W, Fiore-Gartland, Andrew, Walsh, Stephen R, Yusim, Karina, Frahm, Nicole, Elizaga, Marnie L, Maenza, Janine, Scott, Hyman, Mayer, Kenneth H, Goepfert, Paul A, Edupuganti, Srilatha, Pantaleo, Giuseppe, Hutter, Julia, Morris, Daryl E, De Rosa, Stephen C, Geraghty, Daniel E, Robb, Merlin L, Michael, Nelson L, Fischer, Will, Giorgi, Elena E, Malhi, Harman, Pensiero, Michael N, Ferrari, Guido, Tomaras, Georgia D, Montefiori, David C, Gilbert, Peter B, McElrath, M Juliana, Haynes, Barton F, Korber, Bette T, Baden, Lindsey R
Published in The Journal of clinical investigation

Preexisting memory CD4+ T cells contribute to the primary response in an HIV-1 vaccine trial

by Campion, Suzanne L, Brenna, Elena, Thomson, Elaine, Fischer, Will, Ladell, Kristin, McLaren, James E, Price, David A, Frahm, Nicole, McElrath, Juliana M, Cohen, Kristen W, Maenza, Janine R, Walsh, Stephen R, Baden, Lindsey R, Haynes, Barton F, Korber, Bette, Borrow, Persephone, McMichael, Andrew J
Published in The Journal of clinical investigation

Content Validation of the Athletic Training Milestones: A Report from the Association for Athletic Training Education Research Network

by Bacon, Cailee E Welch, Anderson, Barton E, Cavallario, Julie M, Van Lunen, Bonnie L, Eberman, Lindsey E
Published in Journal of athletic training

Genome-wide association study and gene expression analysis identifies CD84 as a predictor of response to etanercept therapy in rheumatoid arthritis

by Cui, Jing, Stahl, Eli A, Saevarsdottir, Saedis, Miceli, Corinne, Diogo, Dorothee, Trynka, Gosia, Raj, Towfique, Mirkov, Maša Umiċeviċ, Canhao, Helena, Ikari, Katsunori, Terao, Chikashi, Okada, Yukinori, Wedrén, Sara, Askling, Johan, Yamanaka, Hisashi, Momohara, Shigeki, Taniguchi, Atsuo, Ohmura, Koichiro, Matsuda, Fumihiko, Mimori, Tsuneyo, Gupta, Namrata, Kuchroo, Manik, Morgan, Ann W, Isaacs, John D, Wilson, Anthony G, Hyrich, Kimme L, Herenius, Marieke, Doorenspleet, Marieke E, Tak, Paul-Peter, Crusius, J Bart A, van der Horst-Bruinsma, Irene E, Wolbink, Gert Jan, van Riel, Piet L C M, van de Laar, Mart, Guchelaar, Henk-Jan, Shadick, Nancy A, Allaart, Cornelia F, Huizinga, Tom W J, Toes, Rene E M, Kimberly, Robert P, Bridges, Jr, S Louis, Criswell, Lindsey A, Moreland, Larry W, Fonseca, João Eurico, de Vries, Niek, Stranger, Barbara E, De Jager, Philip L, Raychaudhuri, Soumya, Weinblatt, Michael E, Gregersen, Peter K, Mariette, Xavier, Barton, Anne, Padyukov, Leonid, Coenen, Marieke J H, Karlson, Elizabeth W, Plenge, Robert M
Published in PLoS genetics

Industrial scale high-throughput screening delivers multiple fast acting macrofilaricides

by Clare, Rachel H, Bardelle, Catherine, Harper, Paul, Hong, W David, Börjesson, Ulf, Johnston, Kelly L, Collier, Matthew, Myhill, Laura, Cassidy, Andrew, Plant, Darren, Plant, Helen, Clark, Roger, Cook, Darren A N, Steven, Andrew, Archer, John, McGillan, Paul, Charoensutthivarakul, Sitthivut, Bibby, Jaclyn, Sharma, Raman, Nixon, Gemma L, Slatko, Barton E, Cantin, Lindsey, Wu, Bo, Turner, Joseph, Ford, Louise, Rich, Kirsty, Wigglesworth, Mark, Berry, Neil G, O'Neill, Paul M, Taylor, Mark J, Ward, Stephen A
Published in Nature communications

A Preparedness Model for Mother–Baby Linked Longitudinal Surveillance for Emerging Threats

by Woodworth, Kate R., Reynolds, Megan R., Burkel, Veronica, Gates, Cymone, Eckert, Valorie, McDermott, Catherine, Barton, Jerusha, Wilburn, Amanda, Halai, Umme-Aiman, Brown, Catherine M., Bocour, Angelica, Longcore, Nicole, Orkis, Lauren, Lopez, Camille Delgado, Sizemore, Lindsey, Ellis, Esther M., Schillie, Sarah, Gupta, Neil, Bowen, Virginia B., Torrone, Elizabeth, Ellington, Sascha R., Delaney, Augustina, Olson, Samantha M., Roth, Nicole M., Whitehill, Florence, Zambrano, Laura D., Meaney-Delman, Dana, Fehrenbach, S. Nicole, Honein, Margaret A., Tong, Van T., Gilboa, Suzanne M.
Published in Maternal and child health journal

Content Validation of the Athletic Training Milestones: A Report from the AATE Research Network

by Welch Bacon, Cailee E, Anderson, Barton E, Cavallario, Julie M, Van Lunen, Bonnie L, Eberman, Lindsey E
Published in Journal of athletic training

The Superfund Research Program Analytics Portal: linking environmental chemical exposure to biological phenotypes

by Gosline, Sara J C, Kim, Doo Nam, Pande, Paritosh, Thomas, Dennis G, Truong, Lisa, Hoffman, Peter, Barton, Michael, Loftus, Joseph, Moran, Addy, Hampton, Shawn, Dowson, Scott, Franklin, Lyndsey, Degnan, David, Anderson, Lindsey, Thessen, Anne, Tanguay, Robyn L, Anderson, Kim A, Waters, Katrina M
Published in Scientific data

Preexisting memory CD[4.sup.+] T cells contribute to the primary response in an HIV-1 vaccine trial

by Campion, Suzanne L, Brenna, Elena, Thomson, Elaine, Fischer, Will, Ladell, Kristin, McLaren, James E, Price, David A, Frahm, Nicole, McElrath, Juliana M, Cohen, Kristen W, Maenza, Janine R, Walsh, Stephen R, Baden, Lindsey R, Haynes, Barton F, Korber, Bette, Borrow, Persephone, McMichael, Andrew J
Published in The Journal of clinical investigation

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

by Sieberts, Solveig K, Zhu, Fan, García-García, Javier, Stahl, Eli, Pratap, Abhishek, Pandey, Gaurav, Pappas, Dimitrios, Aguilar, Daniel, Anton, Bernat, Bonet, Jaume, Eksi, Ridvan, Fornés, Oriol, Guney, Emre, Li, Hongdong, Marín, Manuel Alejandro, Panwar, Bharat, Planas-Iglesias, Joan, Poglayen, Daniel, Cui, Jing, Falcao, Andre O, Suver, Christine, Hoff, Bruce, Balagurusamy, Venkat S K, Dillenberger, Donna, Neto, Elias Chaibub, Norman, Thea, Aittokallio, Tero, Ammad-Ud-Din, Muhammad, Azencott, Chloe-Agathe, Bellón, Víctor, Boeva, Valentina, Bunte, Kerstin, Chheda, Himanshu, Cheng, Lu, Corander, Jukka, Dumontier, Michel, Goldenberg, Anna, Gopalacharyulu, Peddinti, Hajiloo, Mohsen, Hidru, Daniel, Jaiswal, Alok, Kaski, Samuel, Khalfaoui, Beyrem, Khan, Suleiman Ali, Kramer, Eric R, Marttinen, Pekka, Mezlini, Aziz M, Molparia, Bhuvan, Pirinen, Matti, Saarela, Janna, Samwald, Matthias, Stoven, Véronique, Tang, Hao, Tang, Jing, Torkamani, Ali, Vert, Jean-Phillipe, Wang, Bo, Wang, Tao, Wennerberg, Krister, Wineinger, Nathan E, Xiao, Guanghua, Xie, Yang, Yeung, Rae, Zhan, Xiaowei, Zhao, Cheng, Greenberg, Jeff, Kremer, Joel, Michaud, Kaleb, Barton, Anne, Coenen, Marieke, Mariette, Xavier, Miceli, Corinne, Shadick, Nancy, Weinblatt, Michael, de Vries, Niek, Tak, Paul P, Gerlag, Danielle, Huizinga, Tom W J, Kurreeman, Fina, Allaart, Cornelia F, Louis Bridges, Jr, S, Criswell, Lindsey, Moreland, Larry, Klareskog, Lars, Saevarsdottir, Saedis, Padyukov, Leonid, Gregersen, Peter K, Friend, Stephen, Plenge, Robert, Stolovitzky, Gustavo, Oliva, Baldo, Guan, Yuanfang, Mangravite, Lara M
Published in Nature communications

Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients

by Diray-Arce, Joann, Lee, Brian H., van Zalm, Patrick, Chen, Ernie, Konstorum, Anna, Gygi, Jeremy P., Gonzalez-Reiche, Ana Silvia, Hoch, Annmarie, Milliren, Carly E., Overton, James A., Westendorf, Kerstin, Adkisson, Michael, Albert, Marisa, Alvarenga, Bonny, Asashima, Hiromitsu, Beach, Katherine, Bime, Christian, Boddapati, Arun Kumar, Booth, J. Leland, Brakenridge, Scott C., Calfee, Carolyn S., Carreño, Juan Manuel, Carrillo, Sidney, Corry, David B., Croen, Brett, Dela Cruz, Charles S., Eaker, Lily, Farrugia, Keith, Fernandes, Andrea, Fernandez-Sesma, Ana, Fragiadakis, Gabriela K., Furukawa, Sara, Geltman, Janelle N., Ghale, Rajani, Hamilton, Sydney, Agudelo Higuita, Nelson I., Hurley, Kerin C., Iwasaki, Akiko, Jha, Meenakshi, Kangelaris, Kirsten N., Kheradmand, Farrah, Lasky-Su, Jessica, Leipold, Michael, Lentucci, Claudia, Lu, Zhengchun, Manning, Brittany Roth, Manohar, Monali, Martens, Mark, McComsey, Grace A., Melnyk, Nataliya, Mick, Eran, Mosier, Jarrod, Mulder, Lubbertus C.F., Nelson, Allison, Nguyen, Viet, Pellegrini, Kathryn L., Pickering, Harry C., Powell, Debra L., Raskin, Ariel, Reed, Elaine F., Ribeiro, Susan Pereira, Rogers, Angela, Rogowski, Brandon, Rosenberg-Hasson, Yael, Rothman, Jessica, Salehi-Rad, Ramin, Saluvan, Mehmet, Schunk, Ron, Semenza, Nicholas C., Sen, Subha, Sevransky, Jonathan, Seyfert-Margolis, Vicki, Sieg, Scott, Siegel, Sarah A.R., Sigal, Natalia, Siles, Nadia, Simon, Viviana, Singh, Gagandeep, Sinko, Lauren, Song, Li-Zhen, Srivastava, Komal, Sullivan, Peter, Vaysman, Tatyana, Viode, Arthur, Vita, Randi, Wang, Xiaomei, Ward, Dawn C., Woloszczuk, Kyra, van Haren, Simon, van de Guchte, Adriana, Cairns, Charles B., Bosinger, Steven E., Rosen, Lindsey, Steen, Hanno, Langelier, Charles R., Levy, Ofer, Sekaly, Rafick P., Ozonoff, Al, Becker, Patrice M., Peters, Bjoern
Published in Cell reports. Medicine

Genome-Wide Association Study and Gene Expression Analysis Identifies CD84 as a Predictor of Response to Etanercept Therapy in Rheumatoid Arthritis: e1003394

by Cui, Jing, Stahl, Eli A, Saevarsdottir, Saedis, Miceli, Corinne, Diogo, Dorothee, Trynka, Gosia, Raj, Towfique, Mirkov, Masa Umicevic, Canhao, Helena, Ikari, Katsunori, Terao, Chikashi, Okada, Yukinori, Wedrén, Sara, Askling, Johan, Yamanaka, Hisashi, Momohara, Shigeki, Taniguchi, Atsuo, Ohmura, Koichiro, Matsuda, Fumihiko, Mimori, Tsuneyo, Gupta, Namrata, Kuchroo, Manik, Morgan, Ann W, Isaacs, John D, Wilson, Anthony G, Hyrich, Kimme L, Herenius, Marieke, Doorenspleet, Marieke E, Tak, Paul-Peter, Crusius, J BartA, Horst-Bruinsma, E vander, Wolbink, Gert Jan, Riel, C Mvan, Laar, Mart vande, Guchelaar, Henk-Jan, Shadick, Nancy A, Allaart, Cornelia F, Huizinga, Tom WJ, Toes, Rene EM, Kimberly, Robert P, Jr, S LouisBridges, Criswell, Lindsey A, Moreland, Larry W, Fonseca, João Eurico, Vries, Niek de, Stranger, Barbara E, Jager, Philip LDe, Raychaudhuri, Soumya, Weinblatt, Michael E, Gregersen, Peter K, Mariette, Xavier, Barton, Anne, Padyukov, Leonid, Coenen, Marieke JH, Karlson, Elizabeth W, Plenge, Robert M
Published in PLoS genetics

Safety and Immunogenicity of a Recombinant Adenovirus Serotype 35-Vectored HIV-1 Vaccine in Adenovirus Serotype 5 Seronegative and Seropositive Individuals

by Fuchs, Jonathan D, Bart, Pierre-Alexandre, Frahm, Nicole, Morgan, Cecilia, Gilbert, Peter B, Kochar, Nidhi, DeRosa, Stephen C, Tomaras, Georgia D, Wagner, Theresa M, Baden, Lindsey R, Koblin, Beryl A, Rouphael, Nadine G, Kalams, Spyros A, Keefer, Michael C, Goepfert, Paul A, Sobieszczyk, Magdalena E, Mayer, Kenneth H, Swann, Edith, Liao, Hua-Xin, Haynes, Barton F, Graham, Barney S, McElrath, M Juliana
Published in Journal of AIDS & clinical research

HIV-1 VACCINES. Diversion of HIV-1 vaccine-induced immunity by gp41-microbiota cross-reactive antibodies

by Williams, Wilton B, Liao, Hua-Xin, Moody, M Anthony, Kepler, Thomas B, Alam, S Munir, Gao, Feng, Wiehe, Kevin, Trama, Ashley M, Jones, Kathryn, Zhang, Ruijun, Song, Hongshuo, Marshall, Dawn J, Whitesides, John F, Sawatzki, Kaitlin, Hua, Axin, Liu, Pinghuang, Tay, Matthew Z, Seaton, Kelly E, Shen, Xiaoying, Foulger, Andrew, Lloyd, Krissey E, Parks, Robert, Pollara, Justin, Ferrari, Guido, Yu, Jae-Sung, Vandergrift, Nathan, Montefiori, David C, Sobieszczyk, Magdalena E, Hammer, Scott, Karuna, Shelly, Gilbert, Peter, Grove, Doug, Grunenberg, Nicole, McElrath, M Juliana, Mascola, John R, Koup, Richard A, Corey, Lawrence, Nabel, Gary J, Morgan, Cecilia, Churchyard, Gavin, Maenza, Janine, Keefer, Michael, Graham, Barney S, Baden, Lindsey R, Tomaras, Georgia D, Haynes, Barton F
Published in Science (American Association for the Advancement of Science)

Radiation Therapy

by Robins, I., Brachman, D., Schultz, C., Gustavson, M., Molinaro, A., Lautenschlaeger, T., Mehta, M., Phillips, C. A., Dhulibala, S., Hallahan, D., Cardinale, F. S., Dickey, P., Goodrich, I., Sinha, R., Dest, V. M., Chen, C., Olsen, C., Franklin, W., Kavanagh, B. D., Lillehei, K., Damek, D., Gaspar, L. E., Laack, N. N., Link, M. J., Pollock, B. E., Schomberg, P. J., Fraser, J. F., Pannullo, S. C., Moliterno, J., Cobb, W., Stieg, P. E., Jarnet, D., Desmarais, G., Paquette, B., Bujold, R., Mathieu, D., Fortin, D., Vredenburgh, J. J., Sampson, J. H., Reardon, D. A., Kirkpatrick, J. P., Patel, P. N., Suryanarayan, U., Hayhurst, C., Monsalves, E., Van Prooijen, M., Zadeh, G., Chung, C., Boltes, P., Fraser, R. W., Desnoyers, N. R., Park, J. Y., Dane, B., O'Banion, M. K., Tomasi, D., Wang, R., Meek, A. G., Pedersen, P.-H., Enger, P. O., Clump, D. A., Srinivas, R., Wegner, R. E., Burton, S. A., Mintz, A. H., Howard, S. P., Robins, H. I., Tome, W. A., Paravati, A. J., Snyderman, C., Ozhasoglu, C., Quinn, A., Park, Y. G., Mehta, M. J., Bhavsar, D. C., Guarnaschelli, J. N., Imwalle, L., Ying, J., McPherson, C., Warnick, R., Breneman, J., Brown, P. D., Siedow, M., Perry, J., Huebner, A., Chakravarti, A., Werner-Wasik, M., Evans, J., Anuradha, G., David, M., Sara, M., Mark, L., Ricardo, B., Juan, H., Kozono, D., Zinn, P., Barton, K., Rockne, R. C., Mrugala, M., Rockhill, J., Swanson, K. R.
Published in Neuro-oncology (Charlottesville, Va.)