A New Pneumococcal Capsule Type, 10D, is the 100th Serotype and Has a Large cps Fragment from an Oral Streptococcus

by Ganaie, Feroze, Saad, Jamil S, McGee, Lesley, van Tonder, Andries J, Bentley, Stephen D, Lo, Stephanie W, Gladstone, Rebecca A, Turner, Paul, Keenan, Jeremy D, Breiman, Robert F, Nahm, Moon H
Published in mBio

Pre-vaccine serotype composition within a lineage signposts its serotype replacement - a carriage study over 7 years following pneumococcal conjugate vaccine use in the UK

by Gladstone, Rebecca A, Devine, Vanessa, Jones, Jessica, Cleary, David, Jefferies, Johanna M, Bentley, Stephen D, Faust, Saul N, Clarke, Stuart C
Published in Microbial genomics

Five winters of pneumococcal serotype replacement in UK carriage following PCV introduction

by Gladstone, Rebecca A, Jefferies, Johanna M, Tocheva, Anna S, Beard, Kate R, Garley, David, Chong, Wei Wei, Bentley, Stephen D, Faust, Saul N, Clarke, Stuart C
Published in Vaccine

Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci

by Azarian, Taj, Mitchell, Patrick K, Georgieva, Maria, Thompson, Claudette M, Ghouila, Amel, Pollard, Andrew J, von Gottberg, Anne, du Plessis, Mignon, Antonio, Martin, Kwambana-Adams, Brenda A, Clarke, Stuart C, Everett, Dean, Cornick, Jennifer, Sadowy, Ewa, Hryniewicz, Waleria, Skoczynska, Anna, Moïsi, Jennifer C, McGee, Lesley, Beall, Bernard, Metcalf, Benjamin J, Breiman, Robert F, Ho, P L, Reid, Raymond, O'Brien, Katherine L, Gladstone, Rebecca A, Bentley, Stephen D, Hanage, William P
Published in PLoS pathogens

The rise and fall of pneumococcal serotypes carried in the PCV era

by Devine, Vanessa T, Cleary, David W, Jefferies, Johanna M.C, Anderson, Rebecca, Morris, Denise E, Tuck, Andrew C, Gladstone, Rebecca A, O'Doherty, Grace, Kuruparan, Priyasharmila, Bentley, Stephen D, Faust, Saul N, Clarke, Stuart C
Published in Vaccine

Effect on nasopharyngeal pneumococcal carriage of replacing PCV7 with PCV13 in the Expanded Programme of Immunization in The Gambia

by Roca, Anna, Bojang, Abdoulie, Bottomley, Christian, Gladstone, Rebecca A, Adetifa, Jane U, Egere, Uzochukwu, Burr, Sarah, Antonio, Martin, Bentley, Stephen, Kampmann, Beate
Published in Vaccine

Population genetic structure, antibiotic resistance, capsule switching and evolution of invasive pneumococci before conjugate vaccination in Malawi

by Chaguza, Chrispin, Cornick, Jennifer E., Andam, Cheryl P., Gladstone, Rebecca A., Alaerts, Maaike, Musicha, Patrick, Peno, Chikondi, Bar-Zeev, Naor, Kamng'ona, Arox W., Kiran, Anmol M., Msefula, Chisomo L., McGee, Lesley, Breiman, Robert F., Kadioglu, Aras, French, Neil, Heyderman, Robert S., Hanage, William P., Bentley, Stephen D., Everett, Dean B.
Published in Vaccine

Invasive Disease Caused Simultaneously by Dual Serotypes of Streptococcus pneumoniae

by Ndlangisa, Kedibone, du Plessis, Mignon, Allam, Mushal, Wolter, Nicole, de Gouveia, Linda, Klugman, Keith P, Cohen, Cheryl, Gladstone, Rebecca A, von Gottberg, Anne
Published in Journal of clinical microbiology

Early Signals of Vaccine-driven Perturbation Seen in Pneumococcal Carriage Population Genomic Data

by Chaguza, Chrispin, Heinsbroek, Ellen, Gladstone, Rebecca A, Tafatatha, Terence, Alaerts, Maaike, Peno, Chikondi, Cornick, Jennifer E, Musicha, Patrick, Bar-Zeev, Naor, Kamng’ona, Arox, Kadioglu, Aras, McGee, Lesley, Hanage, William P, Breiman, Robert F, Heyderman, Robert S, French, Neil, Everett, Dean B, Bentley, Stephen D
Published in Clinical infectious diseases

Comparative Genomics of Disease and Carriage Serotype 1 Pneumococci

by Chaguza, Chrispin, Ebruke, Chinelo, Senghore, Madikay, Lo, Stephanie W, Tientcheu, Peggy-Estelle, Gladstone, Rebecca A, Tonkin-Hill, Gerry, Cornick, Jennifer E, Yang, Marie, Worwui, Archibald, McGee, Lesley, Breiman, Robert F, Klugman, Keith P, Kadioglu, Aras, Everett, Dean B, Mackenzie, Grant, Croucher, Nicholas J, Roca, Anna, Kwambana-Adams, Brenda A, Antonio, Martin, Bentley, Stephen D
Published in Genome biology and evolution

Phylogenetic Analysis of Invasive Serotype 1 Pneumococcus in South Africa, 1989 to 2013

by du Plessis, Mignon, Allam, Mushal, Tempia, Stefano, Wolter, Nicole, de Gouveia, Linda, von Mollendorf, Claire, Jolley, Keith A, Mbelle, Nontombi, Wadula, Jeannette, Cornick, Jennifer E, Everett, Dean B, McGee, Lesley, Breiman, Robert F, Gladstone, Rebecca A, Bentley, Stephen D, Klugman, Keith P, von Gottberg, Anne
Published in Journal of clinical microbiology

Population genetic structure, serotype distribution and antibiotic resistance of Streptococcus pneumoniae causing invasive disease in children in Argentina

by Gagetti, Paula, Lo, Stephanie W, Hawkins, Paulina A, Gladstone, Rebecca A, Regueira, Mabel, Faccone, Diego, Sireva-Argentina Group, Klugman, Keith P, Breiman, Robert F, McGee, Lesley, Bentley, Stephen D, Corso, Alejandra
Published in Microbial genomics

Genomic surveillance of invasive Streptococcus pneumoniae isolates in the period pre-PCV10 and post-PCV10 introduction in Brazil

by Almeida, Samanta C G, Lo, Stephanie W, Hawkins, Paulina A, Gladstone, Rebecca A, Cassiolato, Ana Paula, Klugman, Keith P, Breiman, Robert F, Bentley, Stephen D, McGee, Lesley, Brandileone, Maria-Cristina de C
Published in Microbial genomics

Streptococcus pneumoniae genomic datasets from an Indian population describing pre-vaccine evolutionary epidemiology using a whole genome sequencing approach

by Nagaraj, Geetha, Govindan, Vandana, Ganaie, Feroze, Venkatesha, V T, Hawkins, Paulina A, Gladstone, Rebecca A, McGee, Lesley, Breiman, Robert F, Bentley, Stephen D, Klugman, Keith P, Lo, Stephanie W, Ravikumar, K L
Published in Microbial genomics

Putative novel cps loci in a large global collection of pneumococci

by van Tonder, Andries J, Gladstone, Rebecca A, Lo, Stephanie W, Nahm, Moon H, du Plessis, Mignon, Cornick, Jennifer, Kwambana-Adams, Brenda, Madhi, Shabir A, Hawkins, Paulina A, Benisty, Rachel, Dagan, Ron, Everett, Dean, Antonio, Martin, Klugman, Keith P, von Gottberg, Anne, Breiman, Robert F, McGee, Lesley, Bentley, Stephen D
Published in Microbial genomics

A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa,...

by Ndlangisa, Kedibone M, du Plessis, Mignon, Lo, Stephanie, de Gouveia, Linda, Chaguza, Chrispin, Antonio, Martin, Kwambana-Adams, Brenda, Cornick, Jennifer, Everett, Dean B, Dagan, Ron, Hawkins, Paulina A, Beall, Bernard, Corso, Alejandra, Grassi Almeida, Samanta Cristine, Ochoa, Theresa J, Obaro, Stephen, Shakoor, Sadia, Donkor, Eric S, Gladstone, Rebecca A, Ho, Pak Leung, Paragi, Metka, Doiphode, Sanjay, Srifuengfung, Somporn, Ford, Rebecca, Moïsi, Jennifer, Saha, Samir K, Bigogo, Godfrey, Sigauque, Betuel, Eser, Özgen Köseoglu, Elmdaghri, Naima, Titov, Leonid, Turner, Paul, Kumar, K L Ravi, Kandasamy, Rama, Egorova, Ekaterina, Ip, Margaret, Breiman, Robert F, Klugman, Keith P, McGee, Lesley, Bentley, Stephen D, von Gottberg, Anne, The Global Pneumococcal Sequencing Consortium
Published in Microbial genomics

Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome...

by Lo, Stephanie W, Gladstone, Rebecca A, van Tonder, Andries J, Lees, John A, du Plessis, Mignon, Benisty, Rachel, Givon-Lavi, Noga, Hawkins, Paulina A, Cornick, Jennifer E, Kwambana-Adams, Brenda, Law, Pierra Y, Ho, Pak Leung, Antonio, Martin, Everett, Dean B, Dagan, Ron, von Gottberg, Anne, Klugman, Keith P, McGee, Lesley, Breiman, Robert F, Bentley, Stephen D, Brooks, Abdullah W, Corso, Alejandra, Davydov, Alexander, Maguire, Alison, Pollard, Andrew, Kiran, Anmol, Skoczynska, Anna, Moiane, Benild, Beall, Bernard, Sigauque, Betuel, Aanensen, David, Lehmann, Deborah, Faccone, Diego, Foster-Nyarko, Ebenezer, Bojang, Ebrima, Egorova, Ekaterina, Voropaeva, Elena, Sampane-Donkor, Eric, Sadowy, Ewa, Bigogo, Godfrey, Mucavele, Helio, Belabbès, Houria, Diawara, Idrissa, Moïsi, Jennifer, Verani, Jennifer, Keenan, Jeremy, Nair Thulasee Bhai, Jyothish N, Ndlangisa, Kedibone M, Zerouali, Khalid, Ravikumar, K L, Titov, Leonid, De Gouveia, Linda, Alaerts, Maaike, Ip, Margaret, de Cunto Brandileone, Maria Cristina, Hasanuzzaman, Md, Paragi, Metka, Nurse-Lucas, Michele, Ali, Mushal, Elmdaghri, Naima, Croucher, Nicholas, Wolter, Nicole, Porat, Nurit, Eser, Özgen Köseoglu, Akpaka, Patrick E, Turner, Paul, Gagetti, Paula, Tientcheu, Peggy-Estelle, Carter, Philip E, Mostowy, Rafal, Kandasamy, Rama, Ford, Rebecca, Henderson, Rebecca, Malaker, Roly, Shakoor, Sadia, Grassi Almeida, Samanta Cristine, Saha, Samir K, Doiphode, Sanjay, Madhi, Shabir A, Devi Sekaran, Shamala, Srifuengfung, Somporn, Obaro, Stephen, Clarke, Stuart C, Nzenze, Susan A, Kastrin, Tamara, Ochoa, Theresa J, Balaji, Veeraraghavan, Hryniewicz, Waleria, Urban, Yulia
Published in The Lancet infectious diseases

Emergence of a multidrug-resistant and virulent Streptococcus pneumoniae lineage mediates serotype replacement after PCV13: an international whole-genome sequencing study

by Lo, Stephanie W, Mellor, Kate, Cohen, Robert, Alonso, Alba Redin, Belman, Sophie, Kumar, Narender, Hawkins, Paulina A, Gladstone, Rebecca A, von Gottberg, Anne, Veeraraghavan, Balaji, Ravikumar, K L, Kandasamy, Rama, Pollard, Sir Andrew J, Saha, Samir K, Bigogo, Godfrey, Antonio, Martin, Kwambana-Adams, Brenda, Mirza, Shaper, Shakoor, Sadia, Nisar, Imran, Cornick, Jennifer E, Lehmann, Deborah, Ford, Rebecca L, Sigauque, Betuel, Turner, Paul, Moïsi, Jennifer, Obaro, Stephen K, Dagan, Ron, Diawara, Idrissa, Skoczyńska, Anna, Wang, Hui, Carter, Philip E, Klugman, Keith P, Rodgers, Gail, Breiman, Robert F, McGee, Lesley, Bentley, Stephen D, Muñoz-Almagro, Carmen, Varon, Emmanuelle
Published in The Lancet. Microbe

Persistence of Nasopharyngeal Pneumococcal Vaccine Serotypes and Increase of Nonvaccine Serotypes Among Vaccinated Infants and Their Mothers 5 Years After Introduction of Pneumococ...

by Usuf, Effua, Bottomley, Christian, Bojang, Ebrima, Cox, Isatou, Bojang, Abdoulie, Gladstone, Rebecca, Kampmann, Beate, Hill, Philip C, Roca, Anna
Published in Clinical infectious diseases

Persistent and Emerging Pneumococcal Carriage Serotypes in a Rural Gambian Community After 10 Years of Pneumococcal Conjugate Vaccine Pressure

by Usuf, Effua, Bottomley, Christian, Gladstone, Rebecca, Bojang, Ebrima, Jawneh, Kaddijatou, Cox, Isatou, Jallow, Edrissa, Bojang, Abdoulie, Greenwood, Brian, Adegbola, Richard A, Bentley, Stephen D, Hill, Philip C, Roca, Anna
Published in Clinical infectious diseases