High Resolution Discovery Proteomics Reveals Candidate Disease Progression Markers of Alzheimer's Disease in Human Cerebrospinal Fluid

by Hendrickson, Ronald C, Lee, Anita Y H, Song, Qinghua, Liaw, Andy, Wiener, Matt, Paweletz, Cloud P, Seeburger, Jeffrey L, Li, Jenny, Meng, Fanyu, Deyanova, Ekaterina G, Mazur, Matthew T, Settlage, Robert E, Zhao, Xuemei, Southwick, Katie, Du, Yi, Holder, Dan, Sachs, Jeffrey R, Laterza, Omar F, Dallob, Aimee, Chappell, Derek L, Snyder, Karen, Modur, Vijay, King, Elizabeth, Joachim, Catharine, Bondarenko, Andrey Y, Shearman, Mark, Soper, Keith A, Smith, A David, Potter, William Z, Koblan, Ken S, Sachs, Alan B, Yates, Nathan A
Published in PloS one

Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy

by Krug, Karsten, Jaehnig, Eric J., Satpathy, Shankha, Blumenberg, Lili, Karpova, Alla, Anurag, Meenakshi, Miles, George, Mertins, Philipp, Geffen, Yifat, Tang, Lauren C., Heiman, David I., Cao, Song, Maruvka, Yosef E., Lei, Jonathan T., Huang, Chen, Kothadia, Ramani B., Colaprico, Antonio, Birger, Chet, Wang, Jarey, Dou, Yongchao, Wen, Bo, Shi, Zhiao, Liao, Yuxing, Wiznerowicz, Maciej, Wyczalkowski, Matthew A., Chen, Xi Steven, Kennedy, Jacob J., Paulovich, Amanda G., Thiagarajan, Mathangi, Kinsinger, Christopher R., Hiltke, Tara, Boja, Emily S., Mesri, Mehdi, Robles, Ana I., Rodriguez, Henry, Westbrook, Thomas F., Ding, Li, Getz, Gad, Clauser, Karl R., Fenyö, David, Ruggles, Kelly V., Zhang, Bing, Mani, D.R., Carr, Steven A., Ellis, Matthew J., Gillette, Michael A., Avanessian, Shayan C., Cai, Shuang, Chan, Daniel, Chen, Xian, Edwards, Nathan J., Hoofnagle, Andrew N., Kane, M. Harry, Ketchum, Karen A., Kuhn, Eric, Levine, Douglas A., Li, Shunqiang, Liebler, Daniel C., Liu, Tao, Luo, Jingqin, Madhavan, Subha, Maher, Chris, McDermott, Jason E., McGarvey, Peter B., Oberti, Mauricio, Pandey, Akhilesh, Payne, Samuel H., Ransohoff, David F., Rivers, Robert C., Rodland, Karin D., Rudnick, Paul, Sanders, Melinda E., Shaw, Kenna M., Shih, Ie-Ming, Slebos, Robbert J.C., Smith, Richard D., Snyder, Michael, Stein, Stephen E., Tabb, David L., Thangudu, Ratna R., Thomas, Stefani, Wang, Yue, White, Forest M., Whiteaker, Jeffrey R., Whiteley, Gordon A., Zhang, Hui, Zhang, Zhen, Zhao, Yingming, Zhu, Heng, Zimmerman, Lisa J.
Published in Cell

Proteogenomic characterization of pancreatic ductal adenocarcinoma

by Cao, Liwei, Huang, Chen, Cui Zhou, Daniel, Hu, Yingwei, Savage, Sara R., Krug, Karsten, Schnaubelt, Michael, Eguez, Rodrigo Vargas, Yang, Weiming, Pan, Jianbo, Wen, Bo, Jiang, Wen, Liao, Yuxing, Terekhanova, Nadezhda V., Cao, Song, Lu, Rita Jui-Hsien, Liu, Ruiyang, Zhu, Houxiang, Wu, Yige, Easwaran, Hariharan, Yoo, Seungyeul, Liu, Wenke, Haibe-Kains, Benjamin, Thiagarajan, Mathangi, Jewell, Scott D., Hostetter, Galen, Li, Qing Kay, Fenyö, David, Wang, Pei, Mani, D.R., Omenn, Gilbert S., Boja, Emily S., Mesri, Mehdi, Robles, Ana I., Rodriguez, Henry, Chan, Daniel W., Hruban, Ralph H., Ding, Li, Zhang, Hui, Amin, Mitual, An, Eunkyung, Bauer, Thomas, Birger, Chet, Birrer, Michael J., Bocik, William, Borucki, Melissa, Carr, Steven A., Cerda, Sandra, Chen, Huan, Chen, Steven, Chesla, David, Chinnaiyan, Arul M., Colaprico, Antonio, Cottingham, Sandra, Derejska, Magdalena, Dhanasekaran, Saravana M., Domagalski, Marcin J., Edwards, Nathan J., Francis, Alicia, Francis, Jesse, Gabriel, Stacey, Gabrovski, Nikolay, Gardner, Johanna, Getz, Gad, Goldthwaite, Charles A., Grady, Pamela, Guo, Shuai, Hariharan, Pushpa, Hindenach, Barbara, Hoadley, Katherine A., Jones, Corbin D., Ketchum, Karen A., Kinsinger, Christopher R., Kusnierz, Katarzyna, Mallery, David, Matteotti, Ronald, McGarvey, Peter B., Minoo, Parham, Paklina, Oxana V., Paulovich, Amanda G., Payne, Samuel H., Potapova, Olga, Qi, Liqun, Roche, Nancy, Rodland, Karin D., Rohrer, Daniel C., Shabunin, Alexey V., Shelton, Troy, Shutack, Yvonne, Singh, Shilpi, Smith, Michael, Smith, Richard D., Sokoll, Lori J., Suh, James, Thangudu, Ratna R., Valley, Dana R., Wang, Wenyi, Wilson, George D., Wiznerowicz, Maciej, Zhang, Zhen
Published in Cell

A proteogenomic portrait of lung squamous cell carcinoma

by Satpathy, Shankha, Krug, Karsten, Jean Beltran, Pierre M, Savage, Sara R, Petralia, Francesca, Kumar-Sinha, Chandan, Dou, Yongchao, Reva, Boris, Kane, M Harry, Avanessian, Shayan C, Vasaikar, Suhas V, Krek, Azra, Lei, Jonathan T, Jaehnig, Eric J, Omelchenko, Tatiana, Geffen, Yifat, Bergstrom, Erik J, Stathias, Vasileios, Christianson, Karen E, Heiman, David I, Cieslik, Marcin P, Cao, Song, Song, Xiaoyu, Ji, Jiayi, Liu, Wenke, Li, Kai, Wen, Bo, Li, Yize, Gümüş, Zeynep H, Selvan, Myvizhi Esai, Soundararajan, Rama, Visal, Tanvi H, Raso, Maria G, Parra, Edwin Roger, Babur, Özgün, Vats, Pankaj, Anand, Shankara, Schraink, Tobias, Cornwell, MacIntosh, Rodrigues, Fernanda Martins, Zhu, Houxiang, Mo, Chia-Kuei, Zhang, Yuping, da Veiga Leprevost, Felipe, Huang, Chen, Chinnaiyan, Arul M, Wyczalkowski, Matthew A, Omenn, Gilbert S, Newton, Chelsea J, Schurer, Stephan, Ruggles, Kelly V, Fenyö, David, Jewell, Scott D, Thiagarajan, Mathangi, Mesri, Mehdi, Rodriguez, Henry, Mani, Sendurai A, Udeshi, Namrata D, Getz, Gad, Suh, James, Li, Qing Kay, Hostetter, Galen, Paik, Paul K, Dhanasekaran, Saravana M, Govindan, Ramaswamy, Ding, Li, Robles, Ana I, Clauser, Karl R, Nesvizhskii, Alexey I, Wang, Pei, Carr, Steven A, Zhang, Bing, Mani, D R, Gillette, Michael A
Published in Cell

Rare variants in APP, PSEN1 and PSEN2 increase risk for AD in late-onset Alzheimer's disease families

by Cruchaga, Carlos, Haller, Gabe, Chakraverty, Sumitra, Mayo, Kevin, Vallania, Francesco L M, Mitra, Robi D, Faber, Kelley, Williamson, Jennifer, Bird, Tom, Diaz-Arrastia, Ramon, Foroud, Tatiana M, Boeve, Bradley F, Graff-Radford, Neill R, St Jean, Pamela, Lawson, Michael, Ehm, Margaret G, Mayeux, Richard, Goate, Alison M
Published in PloS one

Immunomodulatory lipid mediator profiling of cerebrospinal fluid following surgery in older adults

by Terrando, Niccolò, Park, John J, Devinney, Michael, Chan, Cliburn, Cooter, Mary, Avasarala, Pallavi, Mathew, Joseph P, Quinones, Quintin J, Maddipati, Krishna Rao, Berger, Miles
Published in Scientific reports

Fosamprenavir/ritonavir in advanced HIV disease (TRIAD): a randomized study of high-dose, dual-boosted or standard dose fosamprenavir/ritonavir in HIV-1-infected patients with anti...

by Molina, Jean-Michel, Ait-Khaled, Mounir, Rinaldi, Roberto, Penco, Giovanni, Baril, Jean-Guy, Cauda, Roberto, Soriano, Vicente, Pialoux, Gilles, Wire, Mary Beth, Lou, Yu, Givens, Naomi, Craig, Charles, Nichols, W. Garrett, Barbosa, Inês, Yeo, Jane
Published in Journal of antimicrobial chemotherapy

Polymorphism in the Human Major Histocompatibility Complex and Early Viral Decline during Treatment of Chronic Hepatitis C

by YEE, Leland J, IM, Kyungah, WAHED, Abdus S, BUGAWAN, Teodorica, JIA LI, RHODES, Shannon L, ERLICH, Henry, ROSEN, Hugo R, LIANG, T. Jake, HUIYING YANG
Published in Antimicrobial Agents and Chemotherapy