K63-specific deubiquitination by two JAMM/MPN+ complexes: BRISC-associated Brcc36 and proteasomal Poh1

by Cooper, Eric M, Cutcliffe, Colleen, Kristiansen, Troels Z, Pandey, Akhilesh, Pickart, Cecile M, Cohen, Robert E
Published in The EMBO journal

Biochemical Analysis of Angelman Syndrome-associated Mutations in the E3 Ubiquitin Ligase E6-associated Protein

by Cooper, Eric M., Hudson, Amy W., Amos, Joseph, Wagstaff, Joseph, Howley, Peter M.
Published in The Journal of biological chemistry

Ubiquitin-Mediated Degradation of Active Src Tyrosine Kinase

by Harris, Kimya F., Shoji, Ikuo, Cooper, Eric M., Kumar, Sushant, Oda, Hideaki, Howley, Peter M.
Published in Proceedings of the National Academy of Sciences - PNAS

Specificity of the BRISC Deubiquitinating Enzyme Is Not Due to Selective Binding to Lys63-linked Polyubiquitin

by Cooper, Eric M., Boeke, Jef D., Cohen, Robert E.
Published in The Journal of biological chemistry

Total Synthesis of a Functional Designer Eukaryotic Chromosome

by Annaluru, Narayana, Muller, Héloïse, Mitchell, Leslie A., Ramalingam, Sivaprakash, Stracquadanio, Giovanni, Richardson, Sarah M., Dymond, Jessica S., Kuang, Zheng, Scheifele, Lisa Z., Cooper, Eric M., Cai, Yizhi, Zeller, Karen, Agmon, Neta, Han, Jeffrey S., Hadjithomas, Michalis, Tullman, Jennifer, Caravelli, Katrina, Cirelli, Kimberly, Guo, Zheyuan, London, Viktoriya, Yeluru, Apurva, Murugan, Sindurathy, Kandavelou, Karthikeyan, Agier, Nicolas, Fischer, Gilles, Yang, Kun, Martin, Andrew, Bilgel, Murat, Bohutski, Pavlo, Boulier, Kristin M., Capaldo, Brian J., Chang, Joy, Charoen, Kristie, Choi, Woo Jin, Deng, Peter, DiCarlo, James E., Doong, Judy, Dunn, Jessilyn, Feinberg, Jason I., Fernandez, Christopher, Floria, Charlotte E., Gladowski, David, Hadidi, Pasha, Ishizuka, Isabel, Jabbari, Javaneh, Lau, Calvin Y. L., Lee, Pablo A., Li, Sean, Lin, Denise, Linder, Matthias E., Ling, Jonathan, Liu, Jaime, Liu, Jonathan, London, Mariya, Ma, Henry, Mao, Jessica, McDade, Jessica E., McMillan, Alexandra, Moore, Aaron M., Oh, Won Chan, Ouyang, Yu, Patel, Ruchi, Paul, Marina, Paulsen, Laura C., Qiu, Judy, Rhee, Alex, Rubashkin, Matthew G., Soh, Ina Y., Sotuyo, Nathaniel E., Srinivas, Venkatesh, Suarez, Allison, Wong, Andy, Wong, Remus, Xie, Wei Rose, Xu, Yijie, Yu, Allen T., Koszul, Romain, Bader, Joel S., Boeke, Jef D., Chandrasegaran, Srinivasan
Published in Science (American Association for the Advancement of Science)

Insulin-Secreting Non-Islet Cells are Resistant to Autoimmune Destruction

by Lipes, Myra A., Cooper, Eric M., Skelly, Robert, Rhodes, Christopher J., Boschetti, Edward, Weir, Gordon C., Davalli, Alberto M.
Published in Proceedings of the National Academy of Sciences - PNAS

Systematic mutational analysis of the yeast beta-tubulin gene

by Reijo, R A, Cooper, E M, Beagle, G J, Huffaker, T C
Published in Molecular biology of the cell

Impact of aging on the regenerative properties of bone marrow-, muscle-, and adipose-derived mesenchymal stem/stromal cells

by Beane, Olivia S, Fonseca, Vera C, Cooper, Leroy L, Koren, Gideon, Darling, Eric M
Published in PloS one

A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data

by Li, Xiaohong, Brock, Guy N, Rouchka, Eric C, Cooper, Nigel G F, Wu, Dongfeng, O'Toole, Timothy E, Gill, Ryan S, Eteleeb, Abdallah M, O'Brien, Liz, Rai, Shesh N
Published in PloS one

Diagnostic Features, Treatment, and Outcomes of Takayasu Arteritis in a US Cohort of 126 Patients

by Schmidt, Jean, MD, Kermani, Tanaz A., MD, MS, Bacani, A. Kirstin, MD, MS, Crowson, Cynthia S., MS, Cooper, Leslie T., MD, Matteson, Eric L., MD, MPH, Warrington, Kenneth J., MD
Published in Mayo Clinic proceedings

Role of age in acute type A aortic dissection outcome: Report from the International Registry of Acute Aortic Dissection (IRAD)

by Trimarchi, Santi, MD, Eagle, Kim A., MD, Nienaber, Christoph A., MD, Rampoldi, Vincenzo, MD, Jonker, Frederik H.W., MD, De Vincentiis, Carlo, MD, Frigiola, Alessandro, MD, Menicanti, Lorenzo, MD, Tsai, Thomas, MD, Froehlich, Jim, MD, Evangelista, Arturo, MD, Montgomery, Daniel, MD, Bossone, Eduardo, MD, Cooper, Jeanna V., MS, Li, Jin, MS, Deeb, Michael G., MD, Meinhardt, Gabriel, MD, Sundt, Thoralf M., MD, Isselbacher, Eric M., MD
Published in The Journal of thoracic and cardiovascular surgery

Risk factors for hospital morbidity and mortality after the Norwood procedure: A report from the Pediatric Heart Network Single Ventricle Reconstruction trial

by Tabbutt, Sarah, MD, PhD, Ghanayem, Nancy, MD, Ravishankar, Chitra, MD, Sleeper, Lynn A., ScD, Cooper, David S., MD, MPH, Frank, Deborah U., MD, PhD, Lu, Minmin, MS, Pizarro, Christian, MD, Frommelt, Peter, MD, Goldberg, Caren S., MD, Graham, Eric M., MD, Krawczeski, Catherine Dent, MD, Lai, Wyman W., MD, Lewis, Alan, MD, Kirsh, Joel A., MD, Mahony, Lynn, MD, Ohye, Richard G., MD, Simsic, Janet, MD, Lodge, Andrew J., MD, Spurrier, Ellen, MD, Stylianou, Mario, PhD, Laussen, Peter, MD
Published in The Journal of thoracic and cardiovascular surgery

Differential expression of apoptosis related genes in selected strains of Aedes aegypti with different susceptibilities to dengue virus

by Ocampo, Clara B, Caicedo, Paola A, Jaramillo, Gloria, Ursic Bedoya, Raul, Baron, Olga, Serrato, Idalba M, Cooper, Dawn M, Lowenberger, Carl
Published in PloS one

An evolutionarily conserved gene family encodes proton-selective ion channels

by Tu, Yu-Hsiang, Cooper, Alexander J, Teng, Bochuan, Chang, Rui B, Artiga, Daniel J, Turner, Heather N, Mulhall, Eric M, Ye, Wenlei, Smith, Andrew D, Liman, Emily R
Published in Science (American Association for the Advancement of Science)

Cardiovascular Drug Development

by Fordyce, Christopher B., MD, MSc, Roe, Matthew T., MD, MHS, Ahmad, Tariq, MD, MPH, Libby, Peter, MD, Borer, Jeffrey S., MD, Hiatt, William R., MD, Bristow, Michael R., MD, PhD, Packer, Milton, MD, Wasserman, Scott M., MD, Braunstein, Ned, MD, Pitt, Bertram, MD, DeMets, David L., PhD, Cooper-Arnold, Katharine, MPH, Armstrong, Paul W., MD, Berkowitz, Scott D., MD, Scott, Rob, MD, Prats, Jayne, PhD, Galis, Zorina S., PhD, Stockbridge, Norman, MD, PhD, Peterson, Eric D., MD, MPH, Califf, Robert M., MD
Published in Journal of the American College of Cardiology

Reduced adaptation of glutamatergic stress response is associated with pessimistic expectations in depression

by Cooper, Jessica A, Nuutinen, Makiah R, Lawlor, Victoria M, DeVries, Brittany A M, Barrick, Elyssa M, Hossein, Shabnam, Cole, Daniel J, Leonard, Chelsea V, Hahn, Emma C, Teer, Andrew P, Shields, Grant S, Slavich, George M, Ongur, Dost, Jensen, J Eric, Du, Fei, Pizzagalli, Diego A, Treadway, Michael T
Published in Nature communications

Neutrophils promote tumor resistance to radiation therapy

by Wisdom, Amy J., Hong, Cierra S., Lin, Alexander J., Xiang, Yu, Cooper, Daniel E., Zhang, Jin, Xu, Eric S., Kuo, Hsuan-Cheng, Mowery, Yvonne M., Carpenter, David J., Kadakia, Kushal T., Himes, Jonathon E., Luo, Lixia, Ma, Yan, Williams, Nerissa, Cardona, Diana M., Haldar, Malay, Diao, Yarui, Markovina, Stephanie, Schwarz, Julie K., Kirsch, David G.
Published in Proceedings of the National Academy of Sciences - PNAS

High-throughput framework for genetic analyses of adverse drug reactions using electronic health records

by Zheng, Neil S, Stone, Cosby A, Jiang, Lan, Shaffer, Christian M, Kerchberger, V Eric, Chung, Cecilia P, Feng, QiPing, Cox, Nancy J, Stein, C Michael, Roden, Dan M, Denny, Joshua C, Phillips, Elizabeth J, Wei, Wei-Qi
Published in PLoS genetics

Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas

by Abeshouse, Adam, Armenia, Joshua, Auman, J. Todd, Bailey, Matthew H., Baker, Laurence, Balasundaram, Miruna, Balu, Saianand, Baylin, Stephen B., Behera, Madhusmita, Benz, Christopher, Bocklage, Thèrése, Boice, Lori, Bootwalla, Moiz S., Bowlby, Reanne, Boyd, Jeff, Castro, Patricia, Cherniack, Andrew D., Chudamani, Sudha, Cooper, Lee A.D., Davis, Ian J., Demetri, George D., Demicco, Elizabeth G., Ding, Li, DiSaia, Phil, Dottino, Peter, Eschbacher, Jennifer, Fedosenko, Konstantin, Ferguson, Martin L., Gao, Qingsong, Gastier-Foster, Julie M., Gerken, Mark, Godwin, Eryn M., Gordienko, Elena, Grilley-Olson, Juneko E., Gutman, David A., Hegde, Apurva M., Heiman, David I., Helsel, Carmen, Hoadley, Katherine A., Hobensack, Shital, Hornick, Jason L., Hoyle, Alan P., Iacocca, Mary, Ittmann, Michael, Jones, Steven J.M., Kim, Jaegil, Ladanyi, Marc, Lai, Phillip H., Larsson, Erik, Lee, Sanghoon, Lehmann, Kjong-Van, Levine, Douglas A., Liu, Jia, Liu, Wenbin, Liu, Eric Minwei, Lu, Yiling, Madan, Rashna, Magliocco, Anthony, Maki, Robert G., Martinez, Cathleen, Mayo, Michael, McLellan, Michael D., Mozgovoy, Evgeny, Mungall, Andrew J., Mungall, Karen, Noble, Michael S., Olvera, Narciso, Paklina, Oxana, Paulauskis, Joseph, Penny, Robert, Perou, Charles M., Perou, Amy H., Pollock, Raphael E., Ramalingam, Suresh S., Reilly, Colleen, Reynolds, Sheila M., Roach, Jeffrey, Roszik, Jason, Sadeghi, Sara, Saksena, Gordon, Sanchez-Vega, Francisco, Sander, Chris, Schein, Jacqueline E., Shelton, Candace, Shelton, Troy, Shi, Yan, Shmulevich, Ilya, Sipahimalani, Payal, Swanson, Patricia, Tarnuzzer, Roy, Thiessen, Nina, Thorne, Leigh B., Van Tine, Brian A., Verhaak, Roel, Voronina, Olga, Wang, Jing, Wise, Lisa, Wyczalkowski, Matthew, Yau, Christina, Yellapantula, Venkata
Published in Cell

Antigen presenting cell-mediated expansion of human umbilical cord blood yields log-scale expansion of natural killer cells with anti-myeloma activity

by Shah, Nina, Martin-Antonio, Beatriz, Yang, Hong, Ku, Stephanie, Lee, Dean A, Cooper, Laurence J N, Decker, William K, Li, Sufang, Robinson, Simon N, Sekine, Takuya, Parmar, Simrit, Gribben, John, Wang, Michael, Rezvani, Katy, Yvon, Eric, Najjar, Amer, Burks, Jared, Kaur, Indreshpal, Champlin, Richard E, Bollard, Catherine M, Shpall, Elizabeth J
Published in PloS one